Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0540 ATGGGAACTAAGGAGGAAAGCACAGCTAAATCTTCTAAACCGTCTTCTTCGACTCAGGAGATACCGGTGGCACCTGCGTATCCTGATTGGTCAAGCTCTATGCAGGCTTATTATGCTCCCGGAGCCACTCCGCCTCCTTTTTTTGCATCGACTGTCGCTTCTGCAGCTCCCCATCCCTATATGTGGGGAGGCCAGCACCCCTTAATTCCTCCATATGGCACCCCTGTTCCATATCCAGCTATGTATCCTCCTGGCAGTGTCTACGCTCATCCTAGCATGGCAACGACTCCAAGTGCCACACAACAGAGTGCAGAATTTGTAAACAAGGGAGCTAATGGAAAGGACCGGGCTTCCGCCAAAAATTTGAAGGGAAATTCTGCCAATACCGGTTCCAAAGCAGCAGACAACGGAAAGGCAGGTTCAGGTTCAGGAAATGATGGCATCTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCATCAGATGCTAGTGATGAGAATACTAACCAACAGGAATCAGCCACAAACAAGAAAGGGAGCTTTGACCAAATGCTTGCTGACGGAGCCAATGCACAGAACAATTCTGTTGGAAAGGCTGCTGTTCCTGCAACTAATCTTAATATTGGAATGGACTTGTGGCATGCATCTTCTGCAGGTGCTGATGCTTCGAAACCTGCTGCCTCGGGAGCTGTTCCTCCTCCAACAATAATGGGACGTGAAGTCGCACTTGGTGAACAGTGGATACAAGACGAACGTGAACTGAAAAGACAGAAGAGGAAACAATCTAACAGAGAGTCAGCTAGGAGGTCAAGACTGCGCAAGCAGGCCGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCGCTGGGAAACGAGAATCGAACTCTGCGAGATGAGCTTCAGAGAGTATCTGAAGAATGCGAGAAGCTTACAACCGAAAATAATTCTATCAAGGAAGAGTTGGAAAAGTTATGCGGGCCTGATGCAGTTGCTAACCTTGGATAA 999 0.4825 MGTKEESTAKSSKPSSSTQEIPVAPAYPDWSSSMQAYYAPGATPPPFFASTVASAAPHPYMWGGQHPLIPPYGTPVPYPAMYPPGSVYAHPSMATTPSATQQSAEFVNKGANGKDRASAKNLKGNSANTGSKAADNGKAGSGSGNDGISQSAESGSEGSSDASDENTNQQESATNKKGSFDQMLADGANAQNNSVGKAAVPATNLNIGMDLWHASSAGADASKPAASGAVPPPTIMGREVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVESLGNENRTLRDELQRVSEECEKLTTENNSIKEELEKLCGPDAVANLG* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0540 332 Coils Coil 263 318 - -
Aev05g0540 332 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Aev05g0540 332 SMART brlzneu 250 314 IPR004827 GO:0003700|GO:0006355
Aev05g0540 332 MobiDBLite consensus disorder prediction 252 275 - -
Aev05g0540 332 SUPERFAMILY Leucine zipper domain 253 309 IPR046347 GO:0003700|GO:0006355
Aev05g0540 332 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 331 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aev05g0540 332 MobiDBLite consensus disorder prediction 119 189 - -
Aev05g0540 332 Pfam bZIP transcription factor 250 312 IPR004827 GO:0003700|GO:0006355
Aev05g0540 332 MobiDBLite consensus disorder prediction 108 189 - -
Aev05g0540 332 CDD bZIP_plant_GBF1 255 305 IPR045314 GO:0003700|GO:0006355
Aev05g0540 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Aev05g0540 332 PANTHER G-BOX-BINDING FACTOR 1 1 331 - -
Aev05g0540 332 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g0540 332 Gene3D - 253 309 - -
Aev05g0540 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 315 IPR004827 GO:0003700|GO:0006355
Aev05g0540 332 MobiDBLite consensus disorder prediction 1 22 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0540 1 331 bZIP Transcription Factor Family AT4G36730 55.457 1.11e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev05g0540 MFMR 4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0540 K09060 - gmx:778124 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0540 05 3723687 3726030 Aev05g0540 05 3723687 3726030 ECH