Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0535 ATGCCGGTTGATTTGGACAATGTTTCAACAGCTTCAGGGGAAGCTAGTGTCTCTTCCTCTGGCAATCAGACAGTACCCCCAAAATCCACCGCTAAGAAAAAACGAAATCTCCCAGGAATGCCAGATCCAGATGCAGAGGTGATAGCTCTGTCCCCGAAGACCCTTCTGGCCACAAACCGATTCGTGTGCGAAATCTGCAACAAAGGGTTCCAGAGGGATCAGAACCTTCAGCTCCACCGAAGGGGCCACAACCTTCCATGGAAGCTAAGGCAGAGGTCAAGCAAAGAGGTGAGGAAGAGGGTCTACGTCTGTCCAGAGCCAACGTGCGTTCACCACGACCCTTCAAGGGCACTCGGTGATCTCACAGGGATCAAAAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGCGACAAGTGCTCCAAGAAATACGCCGTTCAATCTGATTGGAAAGCTCACTCTAAGATTTGCGGCACCAGAGAGTACAAATGTGATTGTGGGACTCTGTTTTCAAGGAGGGATAGCTTCATCACACACAGAGCTTTCTGTGATGCGTTGGCAGAGGAGAGCGCGAGATCTCAGACTCAGTCTCAAACAACGCAGGCTCAGGCTGGTGTAAAGGCTAGTTCTGACTCAGATTCGAAAGCTGTAACCGCTGATTCTTCATCGCCTCAGGCGGCGCCGCCACCTCCGCCACCGCCTCCTCCTCCTCCAGCCCCGGCACCTCCGGCACCGCCAGCTATTGCTGCTGCTGCTGCTACTACTACTACTACTACTCAGTCAAACAGTGTTGCTGTTGCATCGGCTTTGCAGACGCAGAATCCAGAGTTGCCAGCAAGTTCTCCACAACCACAAATTATAGAGGAACCACAAACCAATACTGCTCTGAATGGGAGCTGTAGCAGCAGCACTAGCTCAACAAGTAATGGTGGTACTAGCAGCAGTGTATTCGCAAGCTTGTTTGCTTCATCAACTGCATCTGCGAGCCTTCAAACCCAAACACCGGCGTTCACTGATTTGATTAGGGCCATGGGGCGCCCTGATCATCCGGTAGACCTCCCGGGGCCTTCATCTTCGGAGCAAATTTCTTTATGCCTTGCAACCAATCACGGCTCATCAATTTTTGCAACAGGAGGACAGGAGCGCCGCCAGTACGCCCCGCCGCCACAGCCAGCCATGTCCGCCACTGCACTATTGCAGAAAGCAGCTCAAATGGGTGTGGCTGCAAACAGTGGTTCGCTCCTACGTGGGTTAGGCATAGTGTCATCTTCTGGTTCATCTTCTTCAGCTCAGCAAGATGGTTTGCAATGGGGTCAGCCACCTGTGGAACCGGAGAGTTCCTCAGTTCCTGCAGGGCTCGGACTCGGGCTCTCATTTGATAGCGGGTCTGGACTGAAGGAACTGATGATGGGGACACCCTCCATGTTTGGTCCAAAGCATACCACCCTCGATTTCCTCGGGTTGGGGATGGCTGCCGGCGGCACCCCTGGTGGAGGCTTATCAGCACTAATCACATCCATCGGTGGCGGTTTAGATGTTACTGCTGCGGCAGCAGCATCGTATGGTAACGGAGAGTTCTCTGGCAAAGATATCGGGAGGAGCTCGTGA 1614 0.5316 MPVDLDNVSTASGEASVSSSGNQTVPPKSTAKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARSQTQSQTTQAQAGVKASSDSDSKAVTADSSSPQAAPPPPPPPPPPPAPAPPAPPAIAAAAATTTTTTQSNSVAVASALQTQNPELPASSPQPQIIEEPQTNTALNGSCSSSTSSTSNGGTSSSVFASLFASSTASASLQTQTPAFTDLIRAMGRPDHPVDLPGPSSSEQISLCLATNHGSSIFATGGQERRQYAPPPQPAMSATALLQKAAQMGVAANSGSLLRGLGIVSSSGSSSSAQQDGLQWGQPPVEPESSSVPAGLGLGLSFDSGSGLKELMMGTPSMFGPKHTTLDFLGLGMAAGGTPGGGLSALITSIGGGLDVTAAAAASYGNGEFSGKDIGRSS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0535 537 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Aev05g0535 537 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Aev05g0535 537 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Aev05g0535 537 Gene3D Classic Zinc Finger 115 196 - -
Aev05g0535 537 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 7 537 - -
Aev05g0535 537 MobiDBLite consensus disorder prediction 1 43 - -
Aev05g0535 537 MobiDBLite consensus disorder prediction 191 225 - -
Aev05g0535 537 Gene3D Classic Zinc Finger 41 107 - -
Aev05g0535 537 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 7 537 - -
Aev05g0535 537 SMART c2h2final6 102 132 IPR013087 -
Aev05g0535 537 SMART c2h2final6 61 83 IPR013087 -
Aev05g0535 537 SMART c2h2final6 137 157 IPR013087 -
Aev05g0535 537 MobiDBLite consensus disorder prediction 9 30 - -
Aev05g0535 537 MobiDBLite consensus disorder prediction 295 315 - -
Aev05g0535 537 MobiDBLite consensus disorder prediction 226 248 - -
Aev05g0535 537 MobiDBLite consensus disorder prediction 427 455 - -
Aev05g0535 537 MobiDBLite consensus disorder prediction 191 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0535 Aev-Chr5 3696911 3699413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0535 1 537 IDZ Gene Family AT5G66730 60.000 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev05g0535 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0535 K25869 - gmx:100806404 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0535 05 3696911 3699413 Aev05g0535 05 3696911 3699413 ECH
Aev05g0535 05 3696911 3699413 Aev08g0290 08 1586589 1589268 ECH