LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev05g0525	ATGTCTGCTCCTGCACCTAGCAATAGTTCCTCTGGTTCATCAAATTCATCATCACCACCACCACCACCACCAACTTCATCGTCACCACCACCACCACCATCCGGTTCATCTCCCCCTCCATCCCCGCCTTCATCTCCTCCACCACCTGCCCCAAGCAGCTCATCCCCGTCATCATCACCCAGTGCAAGCACATCACCTCCTCCTCCAGTTACATCGTCGGATTCTTCTAGTAACTTTGATTCACCATCACCACCGGGAAAATCAATAGCTGCGGATGGGCCATACCGACAGCGGGCAAAGTATGATAGTAGTGGTGATGGTGGTGGTGGTAGTGATAGCGGTAAGGCAATAGTTGGAGCAGTGCTTGGGATAGGGATCCTTGTTCTTATCGTGGTCATCATTTGCGTTATTATGTCGAGAAAGAAGAAAAGAAGGCAAATGTATTATTATGGAGAGCCATCTCGTCATGCTGCAAAAGTGAACAGTAACTATTACAACAACAGTGGACAACACCCAAATTATTATGGAGGTCCACCCCATCCAGACCATGTTGTGAGGGTACAAAATGGAATGGCTATGAATGGTGGTGACTGGGGTGCACCACCCCCTCCTCCAATGATGATGAACAGTGCTGATATGAGCTCTAATTACTCAACAGTAGGACCTCCACCGCTACCTCCCCCTTCCCCAAGCCTTGCACTAGGCCTCAAGGGTGGTAGCTTCACTTATGAGGAATTAGCAGCCGCCACCAACAATTTTGCCGATGATAATTTGTTAGGACAGGGTGGCTTTGGCTATGTGCATAAGGGTGTGCTTCCAAATGGAAAGGAAGTGGCGGTTAAGAGTCTAAAGTCAGGTAGCGGTCAAGGAGAGCGAGAGTTCCAAGCTGAGATTGACATCATTAGTCGTGTTCATCATCGCCATCTCGTGTCACTTGTTGGGTACTCCATTGCTGGTGGGCAGAGAATGTTGGTCTATGAATTTATATCCAACCAAACTCTTGAACATCACCTACATGGAAAGGGTGTGCCAACCATGGATTGGCCTACTAGATTAAGGATTGCAATAGGAGCTGCTAAAGGACTGGCTTATCTTCATGAAGACTGTCATCCTCGCATTATCCATCGTGATATCAAAGCTGCAAATGTCCTTATTGATAATAGTTTTGAAGCAAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTACGGATAATAATACTCATGTCTCAACTCGTGTCATGGGTACATTTGGGTACCTAGCCCCAGAATATGCATCAAGTGGAAAATTGACTGAGAAGTCTGATGTTTTCTCATTTGGTGTCATGTTGTTGGAACTCATAACTGGGAAGCGGCCTGTGGATCACACAAATGCCATGGATGATAGCTTAGTGGATTGGGCTCGACCACTACTGGCTCGTGGGTTGGAGGAAAATGGCAACTTCGGAGAACTGGTGGATCCATTTTTGGAGGGTAACTACAACCACAACGAAATGATAAGGATTGCAGCATGCGCCGCTGCAAGTATTCGCCATTCAGGCAAGAAGCGTCCAAGAATGAGTCAGATTGTGAGAGCCTTAGAAGGTGACGTGTCAATGGATGACTTGAAAGATGGGATTAAGCCATCAGCGTATGGATCGGCTTACAACGCTTCATCTGGGAGCTCAGACTACGATACAATGCAATACAATGCTGATTTACAGAAGTTCAGAAAAGCAGTGTTCTCGAGCCAAGAATATACCAGCAGTGCCTCTAGTGGCGAGAAGTAG	1767	0.4697	MSAPAPSNSSSGSSNSSSPPPPPPTSSSPPPPPSGSSPPPSPPSSPPPPAPSSSSPSSSPSASTSPPPPVTSSDSSSNFDSPSPPGKSIAADGPYRQRAKYDSSGDGGGGSDSGKAIVGAVLGIGILVLIVVIICVIMSRKKKRRQMYYYGEPSRHAAKVNSNYYNNSGQHPNYYGGPPHPDHVVRVQNGMAMNGGDWGAPPPPPMMMNSADMSSNYSTVGPPPLPPPSPSLALGLKGGSFTYEELAAATNNFADDNLLGQGGFGYVHKGVLPNGKEVAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYSIAGGQRMLVYEFISNQTLEHHLHGKGVPTMDWPTRLRIAIGAAKGLAYLHEDCHPRIIHRDIKAANVLIDNSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDHTNAMDDSLVDWARPLLARGLEENGNFGELVDPFLEGNYNHNEMIRIAACAAASIRHSGKKRPRMSQIVRALEGDVSMDDLKDGIKPSAYGSAYNASSGSSDYDTMQYNADLQKFRKAVFSSQEYTSSASSGEK*	589

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev05g0525	588	MobiDBLite	consensus disorder prediction	68	84	-	-
Aev05g0525	588	MobiDBLite	consensus disorder prediction	1	112	-	-
Aev05g0525	588	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	373	385	IPR008271	GO:0004672\|GO:0006468
Aev05g0525	588	SMART	serkin_6	253	489	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aev05g0525	588	Gene3D	Transferase(Phosphotransferase) domain 1	329	539	-	-
Aev05g0525	588	MobiDBLite	consensus disorder prediction	1	15	-	-
Aev05g0525	588	Pfam	Protein tyrosine and serine/threonine kinase	257	458	IPR001245	GO:0004672\|GO:0006468
Aev05g0525	588	Gene3D	Phosphorylase Kinase; domain 1	233	328	-	-
Aev05g0525	588	CDD	STKc_IRAK	259	528	-	-
Aev05g0525	588	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	16	582	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev05g0525	Aev-Chr5	3641307	3644818	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev05g0525	109	574	Trihelix Transcription Factor Family	AT1G70460	51.688	7.61e-155	459

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Aev05g0525		PK_Tyr_Ser-Thr	2e-45	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev05g0525	-		-	gmx:100777163	729.554

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev05g0525	05	3641307	3644818	Aev05g0525	05	3641307	3644818	ECH
	Aev05g0525	05	3641307	3644818	Aev01g0642	01	5890312	5896294	PCT

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