Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0522 ATGGCAGCAAAGGACCAAGTCAACACCGATGAGCCTGCTGAGTCTCCAACTTCTGTCCTCGGTGACGAGGATGTGTGCATTGGTAAGGAAAATGGGTCCTCGCCTATGTCAAAGTCAGCGGTGGAGGAGGAAGAGAAGCTCCTCAATGCCCGGATCGAGGAAGAGAAAGCGCAGCATGAAGAGGCACCTGACCTCACTGATACACAGTTTGACAGATTGGATGAGCTCCTAACGCAAACCAAACTGTACTCTGAGTTTCTCCTTGAGAAGATGGATGAAATCACAACGAATAAGGAGAAAGCGGCTGAGCAAGAAAGCCAGCCAGCACAGAAGAAGAGGGGGCGCGGTGCCAAGAGGAAAGCGGCACAGTGTAATACTGGGAAAGCTAAACGAGCAGTTGCCGTCATGCTGACAAGGTCAGAAGAAAGTGAGAAAATTGAAGATGTTGACTTGACTGAAGAGGAAAGAACTGAGAAGGAGCAGAAGGAACTCGTACCTTTATTAACAGGGGGAAGATTGAAGTCATACCAGCTGAAAGGTGTGAAGTGGTTGATTTCGCTTTGGCAAAATGGACTAAATGGGATTCTTGCCGATCAAATGGGTCTTGGGAAGACAATTCAAACAATAGGGTTTCTTTCACATCTAAAAGGGAAAGGTCTGGATGGGCCATATATGATAATTGCCCCTCTCAGTACACTTTCGAATTGGCTGAATGAAATTGCTAGGTTTGCACCTTCACTCCCGGCTATTATCTACCATGGCAGCAAGATTGAGAGGGATGAAATTCGAAGAAAACACATGCCTCGAACCATTGGACCAAAATTTCCCATTATAATCACTTCTTTTGAGATTGCTTTATTTGATGCAAAGAAACATTTAAGGGGTTACCCGTGGAAGTATCTTGTTGTTGATGAGGGGCATAGACTGAAAAACGCAAAGTGCAAGCTGGTGAAGGAGTTGAGATACTTACATGTAGAAAATAAGCTGCTGCTTTCCGGGACTCCACTTCAGAATGACTTGGCGGAGCTTTGGTCGTTGTTGAACTTCATTTTGCCCGATATTTTTGGATCCCTTGAAGAATTTAAGTCATGGTTTAATCTGTCAGGAAAGTGCAACAATGGAGCAACCAAGGAAGAACTGGAAGAGAAAAGAAGAGCCCAAGTAGTAGGTAAGCTTCATTCCATACTACGGCCCTTTCTCCTGCGTAGGATGAAGTCTGATGTTGAGCTGTCGCTACCAAGGAAAAAGGAGATCATTATCTATGCAAACATGACTGAGCATCAGAAGAAATTGCAGGATCATTTAATTAATAAGACTTTGGTTAACTACGTTGATGGGCAGAAGACAGGTGGACGTAAGCCCGTGTCGTTTAATAATTTGGTTATGCAACTTAGGAAAGTCTGTAACCATCCTGACCTCATAGAGTCAAGCTTTGATGATTTTACACTTTATCCTCCTGTGGATGAGATAGTTGCAAACTGTGGAAAATTCCGTTTGCTTGAACGGTTGTTGGTACGGTTGTTCGCAAAGAAACACAAAGTTCTGATATTCAGTCAGATGACGAAAGTTTTGGATTTAATGGAGTATTATTTTAGTGAGAAGGGCTTTGATGTTTTTAGGATTGATGGTACTGTGAGATTGAGTGATAGAAAACAGCAGATCCAGGACTTCAATGATGTAAACAGCAATTGCAGAATCTTTCTTCTTTCCACTAGGGCTGGTGGATTGGGAATTAACCTCACTGCAGCCGACACATGCATTCTTTATGACAGCGATTGGAATCCTCAAGTGGACTTGCAGGCAATGGATAGGTGTCACAGAATTGGTCAAACAAAACCAGTTCATGTTTACAGGCTCTCGACTGCTCAATCTGTAGAGTGTCGCATGTTGAAAAGAGCTTACAGCAAGTTGAAGCTTGAGCATGTGGTGATTGAGAAAGGACAGTTCCATCAAGAACGTGTAGCAAAGCCTTTCGATGTGAATGAAATGGAGGAAGATGATGTGTTAGCATTGCTTCGTGACGAAGGGACAGCTGAAGATAAAATGATACAGAGAGAGATTAGTGATGAAGACCTGGAGAAGCTGTTGGATCGCAGTGATCTTGTTGCTACTGACTCAAACGACAAGAAGCAGTTGAAAGCTGCACCTGCTGCTGCCTTTCCCCTTAAAGGTCCTGGCTGGGAAGTGGTCATTCCAGCTGCCACTGGTGGCATGCTCTCTACTCTCAACAATTAA 2235 0.4389 MAAKDQVNTDEPAESPTSVLGDEDVCIGKENGSSPMSKSAVEEEEKLLNARIEEEKAQHEEAPDLTDTQFDRLDELLTQTKLYSEFLLEKMDEITTNKEKAAEQESQPAQKKRGRGAKRKAAQCNTGKAKRAVAVMLTRSEESEKIEDVDLTEEERTEKEQKELVPLLTGGRLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGKGLDGPYMIIAPLSTLSNWLNEIARFAPSLPAIIYHGSKIERDEIRRKHMPRTIGPKFPIIITSFEIALFDAKKHLRGYPWKYLVVDEGHRLKNAKCKLVKELRYLHVENKLLLSGTPLQNDLAELWSLLNFILPDIFGSLEEFKSWFNLSGKCNNGATKEELEEKRRAQVVGKLHSILRPFLLRRMKSDVELSLPRKKEIIIYANMTEHQKKLQDHLINKTLVNYVDGQKTGGRKPVSFNNLVMQLRKVCNHPDLIESSFDDFTLYPPVDEIVANCGKFRLLERLLVRLFAKKHKVLIFSQMTKVLDLMEYYFSEKGFDVFRIDGTVRLSDRKQQIQDFNDVNSNCRIFLLSTRAGGLGINLTAADTCILYDSDWNPQVDLQAMDRCHRIGQTKPVHVYRLSTAQSVECRMLKRAYSKLKLEHVVIEKGQFHQERVAKPFDVNEMEEDDVLALLRDEGTAEDKMIQREISDEDLEKLLDRSDLVATDSNDKKQLKAAPAAAFPLKGPGWEVVIPAATGGMLSTLNN* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0522 744 SMART ultradead3 169 364 IPR014001 -
Aev05g0522 744 Gene3D - 409 714 IPR027417 -
Aev05g0522 744 Coils Coil 84 104 - -
Aev05g0522 744 MobiDBLite consensus disorder prediction 39 70 - -
Aev05g0522 744 SMART helicmild6 525 609 IPR001650 -
Aev05g0522 744 MobiDBLite consensus disorder prediction 1 70 - -
Aev05g0522 744 MobiDBLite consensus disorder prediction 97 112 - -
Aev05g0522 744 CDD SF2_C_SNF 485 619 - -
Aev05g0522 744 Coils Coil 38 62 - -
Aev05g0522 744 PANTHER SNF2/RAD54 HELICASE FAMILY 13 743 - -
Aev05g0522 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 696 IPR027417 -
Aev05g0522 744 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 499 655 IPR001650 -
Aev05g0522 744 Pfam Helicase conserved C-terminal domain 498 609 IPR001650 -
Aev05g0522 744 PANTHER BNAC07G16550D PROTEIN 13 743 - -
Aev05g0522 744 Gene3D - 139 402 IPR038718 -
Aev05g0522 744 Pfam SNF2-related domain 176 474 IPR000330 GO:0005524|GO:0140658
Aev05g0522 744 MobiDBLite consensus disorder prediction 97 123 - -
Aev05g0522 744 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 185 353 IPR014001 -
Aev05g0522 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0522 Aev-Chr5 3623213 3627707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0522 159 630 RAD5 or RAD16-like Gene Family AT3G16600 23.917 8.36e-29 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev05g0522 SNF2_N 2.6e-62 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0522 K19001 - gmx:100777687 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0522 05 3623213 3627707 Aev05g0522 05 3623213 3627707 ECH