Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0511 ATGATGCATGGTTCTTGCAGTGGAGCAACACAGCAGGGTCACGTGATGGGACCCTGCACATGTGGTATGTTTCACGGCCAATCAGCTGCGAATTCTTTCTCCATGCTATTCTCGATGCCAAACCACCACCACAAGCCCTACGATGAGCACGAAATGTATTCGTCATACAATACTAGCCAATCATCTTCATCCTCCTCCGTTGACTGCACGCTCTCCCTGGGCACACCCTCCACCCGTTTCACAGAAGACGAAGAGAAGCGTAGCCGCCGCTCCTCAGTCTCCAACTTCTGCTGGGACCTCCTTCAATCCAAACACACCTCCCATCATCACCACCACTCCCAAACTAACAAGTCCACCAACAACCGTACCAACAACAACAACGACCCTCTCCTCGCTCGTCGTTGCGCCAACTGCGACACCACCTCCACACCTCTATGGAGGAACGGTCCTCGCGGCCCTAAGTCGCTGTGCAATGCCTGTGGGATAAGATTCAAGAAAGAGGAGAGGAGGGCGAGTGCCGCCGCCGCAGCACCGGCCGCGACTAGTGGCGGCGTGATGGATTCGTCGCAGATGTACGGGAACCACCATGGAAGCTCGTGGTATGGGCTGCCACAGAGCCAGAAGATGCAGTGTATTTCTCCGGCGGCGATGGGCGGAGAGTTCAGGTTCGTTGACGACGGCGACCGTGATTCCGAGAACGGGATTCCGTTCCTGTCTTGGAGGCTCAACGTTACGGACAGGACAAGCCTCGTTCATGACTTTACGAGATGA 771 0.5564 MMHGSCSGATQQGHVMGPCTCGMFHGQSAANSFSMLFSMPNHHHKPYDEHEMYSSYNTSQSSSSSSVDCTLSLGTPSTRFTEDEEKRSRRSSVSNFCWDLLQSKHTSHHHHHSQTNKSTNNRTNNNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAAAPAATSGGVMDSSQMYGNHHGSSWYGLPQSQKMQCISPAAMGGEFRFVDDGDRDSENGIPFLSWRLNVTDRTSLVHDFTR* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0511 256 ProSitePatterns GATA-type zinc finger domain. 135 160 IPR000679 GO:0006355|GO:0043565
Aev05g0511 256 Gene3D - 131 189 IPR013088 GO:0006355|GO:0008270
Aev05g0511 256 Pfam GATA zinc finger 135 169 IPR000679 GO:0006355|GO:0043565
Aev05g0511 256 SMART GATA_3 129 182 IPR000679 GO:0006355|GO:0043565
Aev05g0511 256 CDD ZnF_GATA 134 166 IPR000679 GO:0006355|GO:0043565
Aev05g0511 256 ProSiteProfiles GATA-type zinc finger domain profile. 129 165 IPR000679 GO:0006355|GO:0043565
Aev05g0511 256 PANTHER GATA TRANSCRIPTION FACTOR 18 4 255 IPR044272 GO:0003700|GO:0009908
Aev05g0511 256 PANTHER GATA TRANSCRIPTION FACTOR 18 4 255 - -
Aev05g0511 256 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 132 170 - -
Aev05g0511 256 MobiDBLite consensus disorder prediction 107 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0511 Aev-Chr5 3558648 3559511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0511 20 256 C2C2-Gata Transcription Factor Family AT3G50870 42.617 6.23e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev05g0511 GATA 6.3e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0511 - - gmx:100790571 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0511 05 3558648 3559511 Aev05g0511 05 3558648 3559511 ECH