Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0506 ATGCCAACAACTTTGGGTTATAATTCCTCTTCTGCTTCCAAATTGTCTTCTTCTCCAACTACTATTGGTGGTGAAAGAAGTGACCAACCATCTCAAACTCACACAACAACAACACTAGCCTTCAATGATCCACCACCACCACCACTTCAAGCTCACCACCACCCTCTATATCCCCCTCCTCATCTTCTTGTCCCATCAAACAATCAGCTCCATCAATCACAAAGAACCAACACAGATCCAGATCTAACCTCACACCATCCTAATACTATTGCCACAACAAGCATAACAAGCACCCCAATAACAGTAGCAACAGCAACAGCAGCAGCAGCAACTACACAAACACCTGCAACTACTACTACCAATACTACAAGTCCTACAACATCTTCTACCTCATTGATCAGGTACAGAGAATGTCTGAGAAACCACGCAGCAAGCATGGGGAGCCATGTGGTAGATGGGTGTGGGGAGTTCATGCCAGGTGGAGAAGAAGGCACACCAGAATCATTGAAATGTGCTGCTTGTGATTGCCACAGGAACTTCCACAGAAAAGAGGTTGAAGGGCCATCCCTTCAAGTACAACAACAACAACAACATAATCATCATATTGCTTCTTCCAATTATCAAAGCTATTACCCCAACAAACACAATGGTCACAGTAACATACCTTCACCTCATCTTCAGTTTCATACACCACCATCATCTTCTCTGCATCAGCAGCAACATCATAGATTCTCTCATGGTATTGCTGCAGCTGCTACCACACCTTCAGGAGGGCTTGTTCAGCCAGTGATGATGGCTTTCGGTGGAGCAGCCGAGTCCTCAAGTGAAGATCTCAACATTTTCCAGTCCAATACAGTAGGAGGGCAGTTATCAGTGCAGATACCATTGTCAAAGAAGAGATTCAGGACAAAGTTCACACAGAATCAGAAAGATAGGATGATGGAGTTTGCTGAGAAGCTTGGGTGGAAGATCCAGAAACATGATGAACAAGAAGTGCAGCAGTTTTGTTCCCAAGTTGGTGTTAAGAGACAAGTTTTCAAGGTTTGGATGCACAACAACAAGCAAGTTATAAAGAAGCAGCAGCAATAG 1089 0.4417 MPTTLGYNSSSASKLSSSPTTIGGERSDQPSQTHTTTTLAFNDPPPPPLQAHHHPLYPPPHLLVPSNNQLHQSQRTNTDPDLTSHHPNTIATTSITSTPITVATATAAAATTQTPATTTTNTTSPTTSSTSLIRYRECLRNHAASMGSHVVDGCGEFMPGGEEGTPESLKCAACDCHRNFHRKEVEGPSLQVQQQQQHNHHIASSNYQSYYPNKHNGHSNIPSPHLQFHTPPSSSLHQQQHHRFSHGIAAAATTPSGGLVQPVMMAFGGAAESSSEDLNIFQSNTVGGQLSVQIPLSKKRFRTKFTQNQKDRMMEFAEKLGWKIQKHDEQEVQQFCSQVGVKRQVFKVWMHNNKQVIKKQQQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0506 362 MobiDBLite consensus disorder prediction 1 40 - -
Aev05g0506 362 MobiDBLite consensus disorder prediction 207 244 - -
Aev05g0506 362 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 73 360 - -
Aev05g0506 362 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 135 184 IPR006456 -
Aev05g0506 362 MobiDBLite consensus disorder prediction 109 129 - -
Aev05g0506 362 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 73 360 - -
Aev05g0506 362 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 134 185 IPR006456 -
Aev05g0506 362 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 298 355 IPR006455 -
Aev05g0506 362 MobiDBLite consensus disorder prediction 1 91 - -
Aev05g0506 362 Pfam ZF-HD protein dimerisation region 133 185 IPR006456 -
Aev05g0506 362 MobiDBLite consensus disorder prediction 41 62 - -
Aev05g0506 362 MobiDBLite consensus disorder prediction 65 91 - -
Aev05g0506 362 Gene3D - 288 358 - -
Aev05g0506 362 SUPERFAMILY Homeodomain-like 296 359 IPR009057 -
Aev05g0506 362 MobiDBLite consensus disorder prediction 207 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0506 Aev-Chr5 3529974 3531062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0506 125 360 ZF-HD Transcription Factor Family AT2G18350 47.718 7.60e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev05g0506 ZF-HD_dimer 7.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0506 - - vra:106776405 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0506 05 3529974 3531062 Aev05g0506 05 3529974 3531062 ECH