Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0501 ATGGGAATTGATAGCGGTGAAGACGCTGAGGCCTTACAGAATCCGCGCTCCTTCAAGGTGCATGGTAGAATGTGCATGGAACTCCACAAAATTCTGGATAGAGTCTTGAGGATATTTCCAGCCATAGAGGAGGCCCGACCTCGAAGCTCATCAGGAATAGAGACTTTGTGTTTGCTGAACAATGCAATTGATAGATCCAAACTAGTTCTCCAACATTGCTCTGAATCCAGCAAACTCTACCTGGCTTGCACGGGGAATGCAGTACTGGCAAGATGCCAAAAGGCAAGAAAATTGTTAGAGCAAAGCTTGATCCAGATTCAGGGCATGGTACCAGTTATGTTAGCTGCAGAGGTCTCTGGAATAATTGATGATCTTGAGTGTGTCAGACTTGTCCTAGACTCTACTGAAGAAGAGGCTGGGAGGGTTATGAATGAGTTGCTTGTGCCAAGTTCTTCAGCATCAGATTCATTGGATGATGATGCTGAAGTTAAAGCTCTTAAGTTTGCAGCACCGAGACTTAACATCACATCTGCAAAGGCCATCGTAATAGAGAAGCGATCTATTAAGAAGTTGTTGGATAAAGTTGGACCAAATGACCAGAAAAAGAAGAAGATTTTGGGATATTTTTACTATCTACTGAGAAAGCATGGAAGCCTTATCATTGGAGAAAAAATGGAGCCGGTACTTTCTCGTAATGAAGAACAAATCACAACTGAGAATTCTAATCACGATTCTCTACAAAACCATCACGTTGAGTCTGACCCAGGCTTGAGCTTTGGTCATTACAGAACTCAGATCGACGATTTGGGTAGAGTTACACCCCCTGATGAATATAAGTGCCCAATATCGTCAAGGTTGATGTATGATCCTGTTGTCATTGCCTCTGGTGTTACATATGAAAGGATGTGGATACAGAAGTGGTTTGATGAGGGTAATGATTTGTGCCCAAAAACAAGAAAGAAACTAGCACATATGGGATTGACTCCTAATATTGCCATGAAGGACTTAATATCAAAGTGGTGCAAAAACACTGGAGTCTCCATTTCTGATCCAAGAAGGATAGCAGAAGACTTTAACTCATTGGAAGCTTCCTCAAATTCCATTAAGAGTTTTGCTAGTTATATAAATGATTTCACCTTGCCATTGGATATAAGTAACATATCACTTGGATCATTGGATGCCAGTTACAATTCAGATGCCTCACATGGTAAGACCACGCGTAGCTCAAATTTGATGCCAAGGAGGACTAGTGAGGATTCTCAGAAACATGAGGCACATGAACAGATGCGTGATGCAGATCTGATACTTTTGTCTAAACTCCATGATCTTCAATGGGATTCTCAATGCCAGATCATTGAAGATCTGAAAAATAATTTGAAACGCAATTACCGAGGTTTTGGTTCTGTGTCACCTGAGAATGTCATTGAACCACTTGTCAGATTTCTGAAAAGTGCTTATGATCGGCATGACATAAAAGCTCTGAGATCTGGAACCCAGCTGCTGTTGGAGTTTGTGAACAACTGCAGAAATGGTCTGGCTGATTTCAGTGAAGATATATTCACTATGTTGGCAAGTTTTCTTGATTCAGAAGTGATTGGAGAAGCTCTTGCAGTAATGGAAGAACTCTCAGGGTATAGAAAAGCTAAAATTGCAGGATCCAGTGCACTTCCTTCTGTTTTAAGTATACTTGATTCCGATAACAAAGATTTCCAACGACAAGTCATTGTAATATTGTATAACTTGTCCTTCAATGGTGAAGTTTTTCCTCACATGCTAGATCTCAAGTGCATCCAAAAACTGCTTCCGTTTTTCAAAGACAGGGCCCTTTTAAGATACTGTGTGTGTATATTGAAAAATCTTTGTGATACCGCAGAGGGTAGGAATTCTGTTGCAGAAACTAAGGGGTGCATATCTTCTGTTGCCGAAATACTTGATGCTGGCAGCAGTGAGGAACAAGAACATGCACTGGCTGTTCTAGTCTCTTTATGCTCTCAGAGTGTGGATTATTGTCAGTTAGTTATAAAGGAGAATGTTATCCTTCCTCTCGCCTTTATCTCCCAGAATGGAAGTGATAAAGCACAGGCAAGTGCATTTGAACTGCTCCGTCTTCTGAGAGATGCCGACCATGCTGAGGATGAAGTTTCCTTTGAACCTAATGTCATCACCTCTCAAAATTCTAACAATCAACCTCAAGAGAAGAAATCATCAAGGGGGTCGACGTTTCTGAAGATACTATCACCATTCTCAAAAAGCAAGAGATGA 2262 0.4107 MGIDSGEDAEALQNPRSFKVHGRMCMELHKILDRVLRIFPAIEEARPRSSSGIETLCLLNNAIDRSKLVLQHCSESSKLYLACTGNAVLARCQKARKLLEQSLIQIQGMVPVMLAAEVSGIIDDLECVRLVLDSTEEEAGRVMNELLVPSSSASDSLDDDAEVKALKFAAPRLNITSAKAIVIEKRSIKKLLDKVGPNDQKKKKILGYFYYLLRKHGSLIIGEKMEPVLSRNEEQITTENSNHDSLQNHHVESDPGLSFGHYRTQIDDLGRVTPPDEYKCPISSRLMYDPVVIASGVTYERMWIQKWFDEGNDLCPKTRKKLAHMGLTPNIAMKDLISKWCKNTGVSISDPRRIAEDFNSLEASSNSIKSFASYINDFTLPLDISNISLGSLDASYNSDASHGKTTRSSNLMPRRTSEDSQKHEAHEQMRDADLILLSKLHDLQWDSQCQIIEDLKNNLKRNYRGFGSVSPENVIEPLVRFLKSAYDRHDIKALRSGTQLLLEFVNNCRNGLADFSEDIFTMLASFLDSEVIGEALAVMEELSGYRKAKIAGSSALPSVLSILDSDNKDFQRQVIVILYNLSFNGEVFPHMLDLKCIQKLLPFFKDRALLRYCVCILKNLCDTAEGRNSVAETKGCISSVAEILDAGSSEEQEHALAVLVSLCSQSVDYCQLVIKENVILPLAFISQNGSDKAQASAFELLRLLRDADHAEDEVSFEPNVITSQNSNNQPQEKKSSRGSTFLKILSPFSKSKR* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0501 753 CDD RING-Ubox_PUB 278 320 IPR045210 -
Aev05g0501 753 MobiDBLite consensus disorder prediction 717 753 - -
Aev05g0501 753 ProSiteProfiles U-box domain profile. 273 347 IPR003613 GO:0004842|GO:0016567
Aev05g0501 753 SUPERFAMILY ARM repeat 436 711 IPR016024 -
Aev05g0501 753 Gene3D - 435 723 IPR011989 -
Aev05g0501 753 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 348 IPR013083 -
Aev05g0501 753 PANTHER U BOX DOMAIN-CONTAINING 3 741 - -
Aev05g0501 753 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 3 741 - -
Aev05g0501 753 SMART Ubox_2 277 340 IPR003613 GO:0004842|GO:0016567
Aev05g0501 753 Pfam U-box domain 275 343 IPR003613 GO:0004842|GO:0016567
Aev05g0501 753 SUPERFAMILY RING/U-box 270 348 - -
Aev05g0501 753 MobiDBLite consensus disorder prediction 396 425 - -
Aev05g0501 753 MobiDBLite consensus disorder prediction 396 415 - -
Aev05g0501 753 MobiDBLite consensus disorder prediction 716 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0501 Aev-Chr5 3491720 3495345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0501 15 729 U-box Gene Family AT4G36550 37.363 1.07e-150 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0501 - - gmx:100791627 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0501 05 3491720 3495345 Aev05g0501 05 3491720 3495345 ECH
Aev05g0501 05 3491720 3495345 Aev01g0651 01 5971083 5982785 PCT