Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0494 ATGGCGGTTGAAGATGTTGATCCCATGGTGGTTCCCAACCTCTCTCCGCCCAACACCTACGAAGCCGTCGTCAACGGCGGCACCTTTGACCGATTGCACGACGGCCACCGCCTCTTCCTCACCGCTTCAGCACAGTTGGCTAGGCGCCGGATTGTGATTGGAGTTTGCGACGGACCTATGCTAGCTAAGAAGCAGTTTGCTGAACTGATACAGCCCATTGAGGAAAGGATACGTAATGTTGAAACTTTCATAAAGTCTATCAAGCCAGAGCTGGAAGTGCAAGCTGTACCAATCACAGATCCTTACGGCCCGTCCATCGTCGATGAAAAATTGGAGGCCGTGGTTGTAAGCAAAGAGACATTGCCGGGTGGATTGGCTGTAAACAGAAAAAGAGCTGAAAGACGCCTTTCACAGTTAAAGATTGAAGTTGTAGATTTGGTCTCTGCAGAATCAGGTGAAATTAAGCTGAGTTCATCAATGTTACGGAAGTGTTTCAAAGTTCAGAATGCTGAACAAACAGTTTTTAGAAGAAGAAAAAAAGAAGAGAAGAAAATATCATTTGGAGCATATCGTTTGCATGACAAAAAACTTGCGTCCGTTGAGAAATTGTCTCATTTCTTGAATCTGTTCAAAAGGGTTGGGTGGGATTTTGCAACATTTCTTTTTGCAAAGATGAATGATCTGATGACGAATTCGTTCCTAAGTTATGTTGAACTGAAGAAACAGGCTATGAAGGACCTTGAAAACGATCTTGACATTGAAGCAGGGCAACTCAACCCTACACAAGACCCTAACCTCACTCAGTTCTTCCAAGAAGTGGATGCAATCAAAATTGAAATGGAAGAGATCACCAATCTCTTATTTGATCTTCAGCAACTGAATGAAGAGGCAAAGTCCACCCACAGTGCGAAAGTCCTTCGTGGACTAAGGGACAGGATGGAGTCCGACATGGTTGCCGTGCTTCGCAAGGCGAAGATCATCAAGGCGAGGCTCGAGGTTCTTGACCAATCCAACATAGCCAACAGAACTTTATCTGAGTCCTACAAGGAGGGTTCCCCAATTGATAGGACTAGGATGTCTGTCACAAATGGTTTGAGGGTCAAGCTTAGGGAAATGATGAATGAGTTCCAGTCCTTGAGGGACAAGATTCTGTCTGATCACAAGGAAGATTTGAAGAGAAGGTACTACACGGCTACCGGGGATGTTCCTAGCGAGGAGGTCATGGAGAAGATGATCTCAGGGAGCATCAAAGTTGAGTTTTTGGCTGGGAAAACAGATGCTGATATGGGCACTCAGGTTAGGCATGAGGCTGTGATGGATATCCATAGGAGTTTGAACAAGCTTCACCAGGTTTTTCTTGATATGGCTATTCTGGTTGAGACACAAGGGGAGAAAGTGGACAACATTGAAGATAATGTGGCTAGTGCTGGTAACTACATCCATGGTGGGACTAATAGTCTCTACTATGCCAATCAGATGAAGAAGAAGAACAAGAAATGGGTCTGTTGGGTTTGTGCTGTGGGGCTGATTGTGCTGTTGACTCTGGTTTCGCTTGAGAGGTGTTCAAACATAAAAGAATTGAGGCAGACTCATGGCCAAATATTGAAAAAGGGCACCATCATGCAAGAGATAGTATCAAGCAGGCTCTTAGCTTCATATGCATCAATAGAGTTTGGGAATTTAGCTTGTGCTCGTTTGCTTTTTGACAGAATAAGTTCACCTAATACTGTCATGTGGAACACCATGATTAGAGCATACTCAAACAGTAATGAGCCAGAAGAAGCACTTCTTTTGTACCATCAAATGCTTTACCATTCAGTACCTCACAATGGCTACACTTTCCCTTTCCTTCTCAAAGCATGTTCTGTACTCTCAGCTTTTGAAGAAACCCAGCAAATCCATGCTCACATCATCAAAAGGGGTTTCGGAACCGAGGTTTACGCCACAAACTCCCTCCTTCGTGTATATGCAACTTCAGCCAATATCGAATCTGCTCAGATCCTATTCAACAGGCTTGCAGCACGAGATATTGTTTCTTGGAATACACTGATTGATGGGTATATAAAATGTGGAAACTTAGATATGGCTTATGAGATGTTTCAAGCCATGCCAGAGAAGAATGTTATCTCTTGGACAACTATGATTGTTGGCTTTGTTAGGACATGCATGCACAAAGAAGCACTGTCTCTCCTGCAGCAAATGCTTGTTGCAGGCATCAAACCTGATCGTATAACCTTGAGTTCCTCTGTTTCAGCATGTGCAGGCCTTGGTTCATTAGAGCAAGGGAGGTGGATTCACACCTACATCGATAAAAATGGAATTAAAATAGATCCAGTTTTGGGTTGTGCTCTTATAGACATGTATGCCAAATGTGGTGAAATGGAAAAGGCATTACAAGTGTTCACTAAGTTGGAGAAGAAATGTGTGTATACATGGACAGCAATAATTGGTGGCTTTGCAGTCCATGGAAATGGAAGAGAAGCTCTAGACTGGTTTATCCAAATGCAGAGATCAGGAATCAAGCCAACTTCTATCACTTTCACCGCAATTCTAACTGCATGTAGTCATGCAGGACTTGTTGAAGAAGGAAAGTCCTTGTTTCAAAGCATTAGTGCTGTTTATAACATGACACCTTCAATGGAACATTATGGATGCATGGTGGATCTTCTAGGTCGTGCAGGGTTGTTGAAAGAAGCAAAGGAGTTCATAGAGTCAATGCCCCTTAAGCCAAATGCTGCAATATGGGGAGCATTACTTAATGCCTGCCACCTGCACAAACATGTTGAGCTTGGCAAAGAGATCGGCAAAATTCTGATTGAATTGGACCCTGATCATGGTGGCCGCTATATTCATTTGGCAAGCATTCTTGCTGCAGATGGAGAATGGAACCAGGCAGTTGAAGTGAGAAGCCAGATCAAACATAGGGGACTGCTAAATCTTCCAGGATGCAGTAGTATAACCCTGAATGGTGTTGTTCATGAGTTCTTTGCTGGAACCGGATCATCCTACCCACATATCCAAGAGATATATGACATGGCCAATCTTATAGCAAAACAGAGAAATTTCAGGGTAGAATAA 3078 0.4344 MAVEDVDPMVVPNLSPPNTYEAVVNGGTFDRLHDGHRLFLTASAQLARRRIVIGVCDGPMLAKKQFAELIQPIEERIRNVETFIKSIKPELEVQAVPITDPYGPSIVDEKLEAVVVSKETLPGGLAVNRKRAERRLSQLKIEVVDLVSAESGEIKLSSSMLRKCFKVQNAEQTVFRRRKKEEKKISFGAYRLHDKKLASVEKLSHFLNLFKRVGWDFATFLFAKMNDLMTNSFLSYVELKKQAMKDLENDLDIEAGQLNPTQDPNLTQFFQEVDAIKIEMEEITNLLFDLQQLNEEAKSTHSAKVLRGLRDRMESDMVAVLRKAKIIKARLEVLDQSNIANRTLSESYKEGSPIDRTRMSVTNGLRVKLREMMNEFQSLRDKILSDHKEDLKRRYYTATGDVPSEEVMEKMISGSIKVEFLAGKTDADMGTQVRHEAVMDIHRSLNKLHQVFLDMAILVETQGEKVDNIEDNVASAGNYIHGGTNSLYYANQMKKKNKKWVCWVCAVGLIVLLTLVSLERCSNIKELRQTHGQILKKGTIMQEIVSSRLLASYASIEFGNLACARLLFDRISSPNTVMWNTMIRAYSNSNEPEEALLLYHQMLYHSVPHNGYTFPFLLKACSVLSAFEETQQIHAHIIKRGFGTEVYATNSLLRVYATSANIESAQILFNRLAARDIVSWNTLIDGYIKCGNLDMAYEMFQAMPEKNVISWTTMIVGFVRTCMHKEALSLLQQMLVAGIKPDRITLSSSVSACAGLGSLEQGRWIHTYIDKNGIKIDPVLGCALIDMYAKCGEMEKALQVFTKLEKKCVYTWTAIIGGFAVHGNGREALDWFIQMQRSGIKPTSITFTAILTACSHAGLVEEGKSLFQSISAVYNMTPSMEHYGCMVDLLGRAGLLKEAKEFIESMPLKPNAAIWGALLNACHLHKHVELGKEIGKILIELDPDHGGRYIHLASILAADGEWNQAVEVRSQIKHRGLLNLPGCSSITLNGVVHEFFAGTGSSYPHIQEIYDMANLIAKQRNFRVE* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0494 1025 Pfam PPR repeat family 807 855 IPR002885 -
Aev05g0494 1025 Pfam PPR repeat family 574 621 IPR002885 -
Aev05g0494 1025 Pfam Cytidylyltransferase-like 26 163 IPR004821 GO:0003824|GO:0009058
Aev05g0494 1025 CDD SynN 269 415 IPR006011 GO:0016020
Aev05g0494 1025 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 777 807 IPR002885 -
Aev05g0494 1025 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 510 1019 - -
Aev05g0494 1025 Pfam Syntaxin 268 463 IPR006011 GO:0016020
Aev05g0494 1025 SMART SynN_4 261 388 IPR006011 GO:0016020
Aev05g0494 1025 Pfam E motif 925 986 IPR046848 -
Aev05g0494 1025 SMART tSNARE_6 423 490 IPR000727 -
Aev05g0494 1025 Gene3D HUPs 22 170 IPR014729 -
Aev05g0494 1025 Gene3D Tetratricopeptide repeat domain 675 778 IPR011990 GO:0005515
Aev05g0494 1025 Coils Coil 129 149 - -
Aev05g0494 1025 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 575 609 IPR002885 -
Aev05g0494 1025 Coils Coil 276 300 - -
Aev05g0494 1025 CDD PPAT_CoAS 23 163 - -
Aev05g0494 1025 Gene3D - 261 392 - -
Aev05g0494 1025 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 510 1019 - -
Aev05g0494 1025 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 808 842 IPR002885 -
Aev05g0494 1025 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 676 710 IPR002885 -
Aev05g0494 1025 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 428 490 IPR000727 -
Aev05g0494 1025 Gene3D Tetratricopeptide repeat domain 782 986 IPR011990 GO:0005515
Aev05g0494 1025 Gene3D Tetratricopeptide repeat domain 516 674 IPR011990 GO:0005515
Aev05g0494 1025 SUPERFAMILY t-snare proteins 263 483 IPR010989 GO:0016020|GO:0016192
Aev05g0494 1025 SUPERFAMILY Nucleotidylyl transferase 23 167 - -
Aev05g0494 1025 Pfam PPR repeat 709 739 IPR002885 -
Aev05g0494 1025 Pfam PPR repeat 882 907 IPR002885 -
Aev05g0494 1025 Pfam PPR repeat 678 708 IPR002885 -
Aev05g0494 1025 TIGRFAM PPR: pentatricopeptide repeat domain 577 603 IPR002885 -
Aev05g0494 1025 TIGRFAM PPR: pentatricopeptide repeat domain 709 742 IPR002885 -
Aev05g0494 1025 TIGRFAM PPR: pentatricopeptide repeat domain 678 708 IPR002885 -
Aev05g0494 1025 TIGRFAM PPR: pentatricopeptide repeat domain 810 843 IPR002885 -
Aev05g0494 1025 Gene3D - 424 515 - -
Aev05g0494 1025 CDD SNARE_syntaxin1-like 432 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0494 Aev-Chr5 3447237 3454945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0494 225 516 SNARE and Associated Proteins AT2G18260 59.801 1.91e-119 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0494 - - aprc:113869652 841.262