Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0468 ATGGCGGGCTTGTTCTCACTAGGCGGTGGTACTAGCAGCAGTAGCAGTAGAGGAAGAGGCAACACCCAGCACCAGCACCACAGCCAACAACAGCCGCATCAAACAACGGAAATCCCTCCCCCAGACACCTATTTCTGGTACAACAAGAATGACGACGTTTCATCCTACCGAGGCTTCGAGCTATGGAACCAGCACCAACAGCATCCACAAGAGCACCTCAGTAATATTCCTCAAGCGAGGCCTCTCTTCCACCAAGATCTCTACTCATCGGCCGCTATGCTAGGCGTGGGCCCAAGCACCGCCTCGGACGATCAGTCGCCCTCGAGATCGGCGTTCGTGGTGACGGCATCGGCCGGAGGGAGCGGCGGCGGAGGGGGAGGGATCAGCTGCCAGGATTGCGGGAACCAGGCGAAGAAAGATTGCCCTCACCTGCGGTGCAGGACATGCTGCAAGAGCCGCGGATTCGATTGCCAAACCCATGTGAAGAGCACTTGGGTTCCTGCTTCTAAGCGCCGCGAGAGACAGCAGCAGCTCGCTTCCTTGCAAACTCAACCAGCTGGAGCCGATATTGTTCCCAAGAGACAGAGAGATCATAGCATCACTCGTTTGCCAACAAACCCTTCTCCCTCAGCCTCCGCCTCAGCCTCAGGGTTAGAGAGTTTTCCTGCTGTGGTGAGCTCTCCAGCGGAGTTCAGGTGCGTACGTGTGAGCTCGATCGACGATGCAGACGACGAGTATGCATATCAAACGGCTGTCAACATTGGAGGCCACGTCTTCAAAGGGATCCTCTACGACACAGGTCCAGACAACAGCAGTTACAACATTGCCGGAGAGAGCTCCTCCGCCGTCTCCGGCGGATCTCAGCCTAATTTGAGCCTCATTGCCGCCGCCGCCACCACCACCACCACAGCAGCACTGGTGCCAGGTGGGGGACTAGTCGATCCCTCATCACTGTATCCGCTTAACCCCTTCATGGCTGGTAGTAGCGGTACGCAATTCTTCCCTCACCACCCAAGATCTTGA 1023 0.5699 MAGLFSLGGGTSSSSSRGRGNTQHQHHSQQQPHQTTEIPPPDTYFWYNKNDDVSSYRGFELWNQHQQHPQEHLSNIPQARPLFHQDLYSSAAMLGVGPSTASDDQSPSRSAFVVTASAGGSGGGGGGISCQDCGNQAKKDCPHLRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLASLQTQPAGADIVPKRQRDHSITRLPTNPSPSASASASGLESFPAVVSSPAEFRCVRVSSIDDADDEYAYQTAVNIGGHVFKGILYDTGPDNSSYNIAGESSSAVSGGSQPNLSLIAAAATTTTTAALVPGGGLVDPSSLYPLNPFMAGSSGTQFFPHHPRS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0468 340 MobiDBLite consensus disorder prediction 201 216 - -
Aev05g0468 340 MobiDBLite consensus disorder prediction 168 184 - -
Aev05g0468 340 MobiDBLite consensus disorder prediction 168 216 - -
Aev05g0468 340 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 129 171 IPR006510 -
Aev05g0468 340 Pfam Domain of unknown function (DUF702) 127 269 - -
Aev05g0468 340 MobiDBLite consensus disorder prediction 7 38 - -
Aev05g0468 340 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 1 336 - -
Aev05g0468 340 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 221 268 IPR006511 -
Aev05g0468 340 MobiDBLite consensus disorder prediction 1 44 - -
Aev05g0468 340 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 336 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0468 Aev-Chr5 3262516 3264439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0468 1 340 C2H2 Transcription Factor Family AT3G51060 45.641 2.47e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aev05g0468 DUF702 3.9e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0468 - - ahf:112720334 370.548