Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0451 ATGGACCAACCACTTCATCAACAGCAACGGCAAACCATGCCGGCTGCAGCCGGAGACGGCGATGAGGCAGCTGCCACGGCGGAGGTTAGGGTTTCGGAGGATTCGAAGCTTGTCGGAGTCTCCGTCGCGGTGGCCGGGGATGCTGACGTGCCGGAGAGACGCGACAGCTGCTGCGTCGCTGGTCCGGAGGTCGCCGTGGCTGCGGACATCACCGTGTTGAAGAGGAAGCGCGGTCGTCCGGCGAAAGGAGCTCCGAAAACGACGACGCTTCCTCCTCCGTCGAGGCAGAAGAAGGAGGAAGAAGATGTTTGTTTCATATGCTTCGACGGTGGAAGCCTCGTTCTCTGTGATCGCAGGGGTTGCCCTAAAGCGTATCATCCTGCGTGTATTAAGCGAGACGACGCCTTCTTTCGCTCAAAGGCCAAATGGAATTGCGGTTGGCATATATGTAGTGTTTGTCAGAAGACATCACATTATATGTGCTATACATGTACGTATTCTTTGTGCAAGGGATGCACAAGAGATTCTGATTATGTTGCTGTAAGAGCAAATCAAGGTTTGTGCGGGTTGTGCATGAGGACTATAATGCTGATTGAGAATCCTGTGCAGGGAGATAAGCCAACGTGTGAAGTTGATTTTGATGATAAAACCAGCTGGGAGTATCTTTTCAAGGTGTATTGGGTTTGTTTGAAAGAGAAGCTAGGTTTGACGATGGATGAGCTCCTTCAAGCTAAAAGCCCATGGAAAAGAGCTGCTCCAGTAAGTTGTAAGGTGGAAACTCCCCGTGACCTTTATCATCTTAAAGATGACAGAGGTTCTGGTTCTGAAAACTCCTGTATAGACATAGAATCAAATAGTTTGACAAACAAGAAGCCTAAGAGAAGAGTTTATAAACAAACTTCTATTTGGGATGGTGTCTCGAATGATGTTGGATACAGTAGACAGGACTTTCCAGTTATTGGAAACATGTGTATAATGAAGAACCAGATCAACCCTAGTGATGTAGTAGTTGGTGGTAGCAGTAATTTAGGAGTTGTGAAATCGGAACCATCTGGTGTTGCACTGAACACTTTGCCATTTCTTTACTCTTCGGGGATGGAGCAGCCATTTAATGGTTTTTTGAATGATAAGTCATGGCATTATTTGGATCCAACTGGAAAAGCTCAAGGACCCTTTTCTATGTTGCAGCTGTATAAGTGGAATGAAAGTAGACTGTTCCCTCCAGATCTCAGAATATGGAGGGCAGATGAGAAACAAGATAGCTCTGTACTGTTAACTGATGCTCTTAATGGGAAGTCTTCCAAAAATATGTCATTGCCATATAACAGCCAACCACAGTCTTTAGGGTCCTGTGTTACATTGGATCATACAAATAATATTCAGCTTGATGGTAGGAATGAAACAAAGACTGAAATTCACACTGACAACCAAATTATCATGCATAGTGGGGTTGTAAGGGTGAATGATACCTGTACCCAGTCTAATGGTAAGAATGAATCTGTAAGGAGCAATGTATTGCACTCTCATTCTTCTAGTTGGACTATGGCAGCAAATAGGAATAACAATGAGGGGCAAAGTGGAAATTTTGAAAGGAGAGAGGAGTCATCCAAATGTGAAATTTCTTGTCACGACCAGCCCCCCCAATCACTAGCCCTTTTCTTTGAATTGAATGAAAATCCTCCCGACATATTAAGGGAAGCTCATAGGATTGAGGGGAACTCAGAAGATAATGGAAATCAAGGCTCAAACAGGACTCCTGAAGGTCAGAGTAACAGTGGGCAGAGTTGTCAGAAACCATCAGACAGCGAAGAGAATTCAGGGCAATCTTCTGGGCAGAACTGGGAATGCCCTCAACCTCAAGTAATTCATCCGACGTGTAGTACATCTGTGTGGCAGGCAATCTTTGGAGAACCCACTGATTTTAGCTCAATAGTTGATGTTGATGAATCAGTTTCAGATCTATTGGCTGAAGTTGAAGCTATGGAATCACTTGGTGGTGGTGGTGGTGGTGGTGGTTTGGAGTCTCCCACTTCAATCATGAAGACAGACGGTTCCAAGAATGACTCTATCGAATTTGCACTTGGGCTTAGCCCAATGCTTGGTGTAGGTAAAGGTGATTCATTGAGCTCAACAGCTGATTTACACTTACCACCTCAGTCCACAGCAGTGCAAGAACCATTCCGGCAACCTGATGTGCATCATCTTCAAAGAATACATGCGGATCATTCTTCTAGAAGTTCTGAAGTTGAGTCTACTTTCTCTAGGATTAGCTGGAACCCAACCAATCAATTTCCCTGGGATCCTAAATGTTGA 2313 0.4496 MDQPLHQQQRQTMPAAAGDGDEAAATAEVRVSEDSKLVGVSVAVAGDADVPERRDSCCVAGPEVAVAADITVLKRKRGRPAKGAPKTTTLPPPSRQKKEEEDVCFICFDGGSLVLCDRRGCPKAYHPACIKRDDAFFRSKAKWNCGWHICSVCQKTSHYMCYTCTYSLCKGCTRDSDYVAVRANQGLCGLCMRTIMLIENPVQGDKPTCEVDFDDKTSWEYLFKVYWVCLKEKLGLTMDELLQAKSPWKRAAPVSCKVETPRDLYHLKDDRGSGSENSCIDIESNSLTNKKPKRRVYKQTSIWDGVSNDVGYSRQDFPVIGNMCIMKNQINPSDVVVGGSSNLGVVKSEPSGVALNTLPFLYSSGMEQPFNGFLNDKSWHYLDPTGKAQGPFSMLQLYKWNESRLFPPDLRIWRADEKQDSSVLLTDALNGKSSKNMSLPYNSQPQSLGSCVTLDHTNNIQLDGRNETKTEIHTDNQIIMHSGVVRVNDTCTQSNGKNESVRSNVLHSHSSSWTMAANRNNNEGQSGNFERREESSKCEISCHDQPPQSLALFFELNENPPDILREAHRIEGNSEDNGNQGSNRTPEGQSNSGQSCQKPSDSEENSGQSSGQNWECPQPQVIHPTCSTSVWQAIFGEPTDFSSIVDVDESVSDLLAEVEAMESLGGGGGGGGLESPTSIMKTDGSKNDSIEFALGLSPMLGVGKGDSLSSTADLHLPPQSTAVQEPFRQPDVHHLQRIHADHSSRSSEVESTFSRISWNPTNQFPWDPKC* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0451 770 SMART gyf_5 377 432 IPR003169 GO:0005515
Aev05g0451 770 ProSiteProfiles GYF domain profile. 376 430 IPR003169 GO:0005515
Aev05g0451 770 MobiDBLite consensus disorder prediction 491 532 - -
Aev05g0451 770 ProSiteProfiles Zinc finger PHD-type profile. 101 167 IPR019787 -
Aev05g0451 770 MobiDBLite consensus disorder prediction 730 748 - -
Aev05g0451 770 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 23 294 - -
Aev05g0451 770 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 369 617 - -
Aev05g0451 770 MobiDBLite consensus disorder prediction 572 620 - -
Aev05g0451 770 CDD GYF 376 431 IPR003169 GO:0005515
Aev05g0451 770 SUPERFAMILY GYF domain 373 430 IPR035445 -
Aev05g0451 770 ProSitePatterns Zinc finger PHD-type signature. 104 164 IPR019786 -
Aev05g0451 770 SUPERFAMILY FYVE/PHD zinc finger 74 148 IPR011011 -
Aev05g0451 770 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 623 753 - -
Aev05g0451 770 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 369 617 - -
Aev05g0451 770 Pfam GYF domain 379 419 IPR003169 GO:0005515
Aev05g0451 770 MobiDBLite consensus disorder prediction 724 770 - -
Aev05g0451 770 MobiDBLite consensus disorder prediction 1 30 - -
Aev05g0451 770 CDD PHD5_NSD 103 148 - -
Aev05g0451 770 MobiDBLite consensus disorder prediction 491 525 - -
Aev05g0451 770 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 191 IPR013083 -
Aev05g0451 770 MobiDBLite consensus disorder prediction 749 764 - -
Aev05g0451 770 MobiDBLite consensus disorder prediction 662 684 - -
Aev05g0451 770 SMART PHD_3 103 149 IPR001965 -
Aev05g0451 770 MobiDBLite consensus disorder prediction 574 620 - -
Aev05g0451 770 Gene3D - 378 434 IPR035445 -
Aev05g0451 770 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 623 753 - -
Aev05g0451 770 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 23 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0451 Aev-Chr5 3130013 3133260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0451 101 174 PHD Transcription Factor Family AT4G14920 33.784 8.06e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0451 - - aip:107642933 980.704