Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0450 ATGGACCAACCACTGCACCAACAGCAGCAGCAAACCCCAAACGCTGCTGCCGGAGACTGCGGGGAGGCAGCTGCCATGGCGGAGGTTAAGGTTTCAGAGGATTCGAAGCTTGTCGGAGTCCCCGTCGCGGTGGCCGGAGATGCTGAAGTGGCGGAGAGAAGGGACAGCTGCTGCGTCGCTGGTCCGGAGGTCGCGGTGGCTGCAGACAGCGTTGGGCTGAAGAGGAAGCGCGGTCGTCCGGCGAAGGGAGCTCCTAAAACGACGGCGCTTCCTCCTCCGTCAAGGCAGAAGAGTGAGGAAGAGGATGTGTGTTTCATATGCTTCGATGGTGGAAGCCTCGTTCTCTGTGATCGCCGGGATTGCCCTAAAGCGTATCATCCTGCGTGTATTAAGCGAGACGATGCCTTCTTTCGTTCAAAGGCCAAATGGAATTGCGGTTGGCACATTTGTAGTTTTTGTCAGAAAGCGGCCCATTTTATGTGCTATACTTGTACGTATTCTGTGTGCAAGGGATGTACACAATATGCTGATTTTGTCTGTGTCAGAGGAAATAAAGGTTTGTGTGGAATATGCATGAGAACGATAATGCTGATTGAGAATAGTGCCCAGGGAAATAAGGAAACGTGTGAAGTGGATTTTGATGACAAAAGCAGCTGGGAGTATCTTTTCAAGGTGTATTGGGTGTTATTGAAAGGGCAGCTATCTTTAACGTTTGATGAGCTCCTCCGAGCTAGACATCCATGGAGTGGTGTTTCTCTATTGAGTAGTAAGGTTCAACCTCCCCGTGAAATTCATTCTCTTAAAGATGACAAAGGTTCAGATAACTCCTGTATTGACATAGAATCAAATAATTTGAAAAACAAGAAGTCTACGAGACAACAAAAGCTTCTTAGTAAGGGGGATTGCTTTGATCAGATAACCTCAACTAGTGATCACAGTGTCTCTTTGCCAGAATGCTCAAAATGGGCATCAAAGGATCTTCTAGAGTTTGTTGCACATATGAAAAATGGTCATACATCTCTCCTGTCTCAATTTGATGTCCAGAATCTCTTGCTAGAGTATGTGAAGAAAAACAATCTTCGTGACCCCCAGCAGAAGTGCCAAATTGTTTGCGACCCTAGGCTAATGAAGTTGTTTGGAAGATCACGTGTTGGCCACATTGAAATGCTAAAGCTCCTCGAATCCCACTTTCTCATAAAGGACGATAGCCCTGCAGAAGATACTTTGAAAGCTGGAATTATTGATGCTTTTGCTAGCGAAGCAAACACAATTGACAATAACAACAAACAGTTCGCATTAGTCAGTGATAAGAAATGTAAAATATTGCCACCAAATAATCCAGATGCATATGCTGCAATAAATGCTCACAACATTAATTTGATGTACTTGCGGAGAAGTTTGATGGAGAATCTAATTGAAGATGTCGAAAAGATTCATGACAAGGTTGTTGGTTCATTTGTACGGATAAAAATATCTAGCAGTGATAAAAAACAAGAGATGTATAGGCTCGTCCAAGTTGTAGGTACAAGCAGGGCTACTGAACCATACAAAATTGGCACCAGGACAACTGATATTGTGCTTGAAATTTTAAACTTAAACAGGAAGGAGTTAATACCAATAGATGAGATTTCAAATCAGGAGTTCTCGGAGGATGAATGCAAGCGATTGCGTCAAAGTATAAAATATGGGCTCTCGAAGAGATTGACTGTGGGAGAGATTATGGACAAAGCATTGACACTCCAAGCAATGAGAGCTAATGATATACTAAACTCACCAGAGGAACGACAACGCAGGCTGGGTGAAATTCCAGAGGTACACTCTGACCCAAATTTGGATTTAATGTTTGAGTCTGATGAAGATGCTGGAGAGTCGGATAAAAGGAAGCAAGATGGCAATATATGGTCAAAATATCTTGCATTTGACAGAAGAGAGAGGGAGGAGGCTAGTTTGCCTAAAAGTTGCAATAGTGACTTGAATGATGATGGATGCAAAACACAAGACTTGCCTACTGCTGGTGAATCGAATAGGAATGTAGGCATGGCAAAATCTCAGATCAACCCTAGTATTAATACATCATTGAATGATAGCACTAATGTAGTTGTGAAATCAGAAGCATCTGGTGTTGCATTGGACATTTCATCATCTCTTCAGTCTATAGGGATGGAGCAATCATTTAATGAATTTTTGAATGATAAATTATGGCATTATCAAGATCCATCTGGGAAGGTTCAAGGACCTTTTTCGATGTTGCAGATGTATAAATGGAATGCAAGTGGACATTTCCCTCCAGATCTCAGAGTTTGGAGGATAGATGAGAAACAAGATAACTCTATATTGTTAACTGATGCACTCAGTGGAAAGTGTTCGAAAAATGTTTCCTTGCCAAATGACAGCCAACTACTGTCTTTAGGGTCCAGTGTTACATTGGGTAGTAAAGATAATAGTCAGGATGGTGGGAATAATGGAACAAGGAGTGAAACTCATGCGGACAACCAAATTACTAAGCAAAGCAGGGAGCAAAAGGTGGATGATACTTGTACCCAGTCTGATGGTAGAGATGAATCTGTTAAGAGCAATGGATGGCATGACCAGCCCCTTGCATACCCTTCACAGCCTTCAATGGACTTTTTTGAGAAATTGAAGGAGGTGCCTTCTGATAAATTAAAGGAAGGGCATCAGATTGAAGGAAACCTAGTAGATAATGTAAATTATGGCTCGAACAGGACTGCTGAGGGTCAGAATAACAGTGGGCAGAGTTATCAAAAGCAATCTTACAGTGAAGAGAATTCAGGGCAATCTTCTGAACAGAACTGGAGAGGCCCTCTAGTAAATAGTTCTTCCAATTGTGTTGTTACCACATCAACTGAAGTTTCAATTATGAATACATCATCACTTAAGCTAGGATTTGATTTGCATAGTTCTCCCAGTTGTGTGGTTACCACATCAGCTGAAGTTTCAATGATGAAGACATCGCCACTTAAGCTAGGATTTGATTTGGATAGTTCTTCGAATTGTGTTGTTACTACATCAGCTGAAGTTTCTATGACAAAGACATCACCACTTAAGCTAGGATTTGATTTGCATAGTCCCCCATCCCATCCAGCTTGTACTACATCTACTTGGCAAGCAATCTTTGGCGAACCCACTGATTTTAGCACAATAGCTGATGTTGATGAATCAGTTTCTGATCTGTTGGCTGAAGTTGAAGCGATGGAATCACTGGGTGGTGGCGGCTTGGAATCACCCACTTCAATCATGAAGTGTGGTGAAGAATTGGCGGGTAGTTCTAAAAATGATTGTCTGAGTTTTGCGGATGGGCTTAGCCCAGTGCTTGATGCTGGTAAAGGTGATGCACTGAGTACCACAGGTGACTTGCACTTACAACCTCAGTCCGCAGCAGCAGAGGAACCGTTAAGGCAAACAGATACTCATCATCATCATCAAAGAATATCTGAGGGATCTTCCACAAGAAGTTCTGAACTTAAGGTGGGTGCAAAGAACGTTAGTGCTTCAGGTTATCAATGGGAATCGGGCTCGGAAAATTCAGCCATTGGTCCATCCGCTGCAACCTGGGGCATTGCTACAAACACCACTTGGAGACCTGGGCCAGAGAATACAAACTTGGCATGGGGTGGAATGGATCGAGGAAATGTAAACATGGGTTGGGGAGTGGGTCAGTCAGCAGTGCAGGAGAATAGGAGCACAAATTCATACAATCCCGTAGTAACTCAAAGCTTGGGTGGAAGCCACACAAGATATGGCAGTGATCGATTATCTATGCCCAGAGATCGGGCATTTCATGGTCATGGTAGGGAATCAGGTTCTGGCAGAGGCAAAAATCCATGGAGCAAGCAACTTGTATTTGGTTTTGGAAATGGAGGCTCACACAGGCCTCCGCCTAAAGGGCAACGTGTTTGTAAATTTTATGAAAGTGGGCACTGTAAGAAGGGAGCATCCTGTGATTATTATCACCCGTAA 3978 0.4324 MDQPLHQQQQQTPNAAAGDCGEAAAMAEVKVSEDSKLVGVPVAVAGDAEVAERRDSCCVAGPEVAVAADSVGLKRKRGRPAKGAPKTTALPPPSRQKSEEEDVCFICFDGGSLVLCDRRDCPKAYHPACIKRDDAFFRSKAKWNCGWHICSFCQKAAHFMCYTCTYSVCKGCTQYADFVCVRGNKGLCGICMRTIMLIENSAQGNKETCEVDFDDKSSWEYLFKVYWVLLKGQLSLTFDELLRARHPWSGVSLLSSKVQPPREIHSLKDDKGSDNSCIDIESNNLKNKKSTRQQKLLSKGDCFDQITSTSDHSVSLPECSKWASKDLLEFVAHMKNGHTSLLSQFDVQNLLLEYVKKNNLRDPQQKCQIVCDPRLMKLFGRSRVGHIEMLKLLESHFLIKDDSPAEDTLKAGIIDAFASEANTIDNNNKQFALVSDKKCKILPPNNPDAYAAINAHNINLMYLRRSLMENLIEDVEKIHDKVVGSFVRIKISSSDKKQEMYRLVQVVGTSRATEPYKIGTRTTDIVLEILNLNRKELIPIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEIMDKALTLQAMRANDILNSPEERQRRLGEIPEVHSDPNLDLMFESDEDAGESDKRKQDGNIWSKYLAFDRREREEASLPKSCNSDLNDDGCKTQDLPTAGESNRNVGMAKSQINPSINTSLNDSTNVVVKSEASGVALDISSSLQSIGMEQSFNEFLNDKLWHYQDPSGKVQGPFSMLQMYKWNASGHFPPDLRVWRIDEKQDNSILLTDALSGKCSKNVSLPNDSQLLSLGSSVTLGSKDNSQDGGNNGTRSETHADNQITKQSREQKVDDTCTQSDGRDESVKSNGWHDQPLAYPSQPSMDFFEKLKEVPSDKLKEGHQIEGNLVDNVNYGSNRTAEGQNNSGQSYQKQSYSEENSGQSSEQNWRGPLVNSSSNCVVTTSTEVSIMNTSSLKLGFDLHSSPSCVVTTSAEVSMMKTSPLKLGFDLDSSSNCVVTTSAEVSMTKTSPLKLGFDLHSPPSHPACTTSTWQAIFGEPTDFSTIADVDESVSDLLAEVEAMESLGGGGLESPTSIMKCGEELAGSSKNDCLSFADGLSPVLDAGKGDALSTTGDLHLQPQSAAAEEPLRQTDTHHHHQRISEGSSTRSSELKVGAKNVSASGYQWESGSENSAIGPSAATWGIATNTTWRPGPENTNLAWGGMDRGNVNMGWGVGQSAVQENRSTNSYNPVVTQSLGGSHTRYGSDRLSMPRDRAFHGHGRESGSGRGKNPWSKQLVFGFGNGGSHRPPPKGQRVCKFYESGHCKKGASCDYYHP* 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0450 1325 Pfam SWIB/MDM2 domain 325 397 IPR003121 -
Aev05g0450 1325 MobiDBLite consensus disorder prediction 805 871 - -
Aev05g0450 1325 SUPERFAMILY CCCH zinc finger 1300 1324 IPR036855 GO:0046872
Aev05g0450 1325 Pfam GYF domain 734 775 IPR003169 GO:0005515
Aev05g0450 1325 MobiDBLite consensus disorder prediction 831 859 - -
Aev05g0450 1325 MobiDBLite consensus disorder prediction 1261 1282 - -
Aev05g0450 1325 MobiDBLite consensus disorder prediction 887 945 - -
Aev05g0450 1325 ProSiteProfiles Plus3 domain profile. 452 585 IPR004343 GO:0003677
Aev05g0450 1325 SUPERFAMILY FYVE/PHD zinc finger 79 148 IPR011011 -
Aev05g0450 1325 MobiDBLite consensus disorder prediction 805 830 - -
Aev05g0450 1325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 191 IPR013083 -
Aev05g0450 1325 ProSiteProfiles Zinc finger C3H1-type profile. 1300 1325 IPR000571 GO:0046872
Aev05g0450 1325 SUPERFAMILY Plus3-like 453 581 IPR036128 GO:0003677
Aev05g0450 1325 ProSitePatterns Zinc finger PHD-type signature. 104 164 IPR019786 -
Aev05g0450 1325 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 1009 1325 - -
Aev05g0450 1325 SUPERFAMILY GYF domain 727 784 IPR035445 -
Aev05g0450 1325 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 24 981 - -
Aev05g0450 1325 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 24 981 - -
Aev05g0450 1325 Gene3D SWIB/MDM2 domain 310 406 IPR036885 -
Aev05g0450 1325 SUPERFAMILY SWIB/MDM2 domain 322 398 IPR036885 -
Aev05g0450 1325 SMART rtf1 452 562 IPR004343 GO:0003677
Aev05g0450 1325 CDD SWIB-MDM2_like 322 397 - -
Aev05g0450 1325 CDD PHD5_NSD 103 148 - -
Aev05g0450 1325 Pfam Plus-3 domain 457 560 IPR004343 GO:0003677
Aev05g0450 1325 ProSiteProfiles SWIB/MDM2 domain profile. 316 399 IPR003121 -
Aev05g0450 1325 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g0450 1325 Gene3D - 733 789 IPR035445 -
Aev05g0450 1325 CDD GYF 731 786 IPR003169 GO:0005515
Aev05g0450 1325 ProSiteProfiles GYF domain profile. 731 785 IPR003169 GO:0005515
Aev05g0450 1325 MobiDBLite consensus disorder prediction 1 16 - -
Aev05g0450 1325 MobiDBLite consensus disorder prediction 75 96 - -
Aev05g0450 1325 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 1009 1325 - -
Aev05g0450 1325 MobiDBLite consensus disorder prediction 1131 1163 - -
Aev05g0450 1325 SMART PHD_3 103 149 IPR001965 -
Aev05g0450 1325 SMART gyf_5 732 787 IPR003169 GO:0005515
Aev05g0450 1325 MobiDBLite consensus disorder prediction 1138 1153 - -
Aev05g0450 1325 MobiDBLite consensus disorder prediction 899 945 - -
Aev05g0450 1325 Gene3D - 453 582 IPR036128 GO:0003677
Aev05g0450 1325 SMART swib_2 324 402 IPR019835 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0450 Aev-Chr5 3115848 3122051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0450 101 181 PHD Transcription Factor Family AT4G14920 32.099 2.38e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-BAF60b Aev05g0450 Plus-3 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0450 - - aprc:113869503 1770.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0450 05 3115848 3122051 Aev05g0450 05 3115848 3122051 ECH