Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0445 ATGCGAACGCTTTGTGATGCTTGTGAGAGCGCGGCGGCTATTGTTTTCTGCGCCGCTGATGAAGCTGCACTCTGCCGTGCCTGCGATGAGAAGGTTCACATGTGTAATAAGCTAGCTAGCCGGCATGTGAGAGTTGGTCTTGCAAGTCCAAGTGATGTGCCTCGCTGTGACATATGCGAGAATGCACCAGCTTTCTTCTATTGCGAGACAGATGGAAGTTCCCTTTGTTTACAGTGCGATATGATAGTTCATGTTGGAGGTAAAAGAACACATGGAAGATATCTTCTCTTTAGGCAACGAGTTGAGTTTCCAGGAGATAAATCTAGTCATGGAGACAACCCCGGTTCGCAACCGATGGAACCGGGTGAGACTAAAAGGGGACAGAATCCTCTTCCCAAACTGAAAATGGGGGAGAAGCAGCAAAATAATCACAGGATGCCTCTGGTTTCGACGCCAGAACCTGATGCTGATGGGCATGCCAAGATGGAAACTAAACTGATTGATTTGAACATGAAGCCTAACAGAATACATGAACAAGCTTCAAATAATCAGCCGTGA 558 0.4695 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKSSHGDNPGSQPMEPGETKRGQNPLPKLKMGEKQQNNHRMPLVSTPEPDADGHAKMETKLIDLNMKPNRIHEQASNNQP* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0445 185 CDD Bbox1_BBX-like 4 47 - -
Aev05g0445 185 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 184 - -
Aev05g0445 185 SUPERFAMILY B-box zinc-binding domain 48 86 - -
Aev05g0445 185 MobiDBLite consensus disorder prediction 104 158 - -
Aev05g0445 185 SMART bboxneu5 51 96 IPR000315 GO:0008270
Aev05g0445 185 SMART bboxneu5 1 47 IPR000315 GO:0008270
Aev05g0445 185 PANTHER SALT TOLERANCE-LIKE PROTEIN 1 184 - -
Aev05g0445 185 Gene3D Classic Zinc Finger 2 91 - -
Aev05g0445 185 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Aev05g0445 185 CDD Bbox1_BBX-like 56 96 - -
Aev05g0445 185 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aev05g0445 185 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Aev05g0445 185 Pfam B-box zinc finger 52 90 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0445 Aev-Chr5 3094671 3096263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0445 1 184 C2C2-CO-like Transcription Factor Family AT4G38960 61.413 2.30e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Aev05g0445 zf-B_box 2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0445 - - gmx:100780544 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0445 05 3094671 3096263 Aev05g0445 05 3094671 3096263 ECH
Aev04g3392 04 32610221 32611833 Aev05g0445 05 3094671 3096263 ECH