Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0440 ATGCAAAAAGTAGAAGAGAGTGAAATTGGGGATGTAGAAAGGATCCAAAGTTACTACTACACTATGGCTGGCTTCAGCGGCGATGAAACTGCTCCTTTCTTCGGCTTCCTCGGTGCTGCCGCTGCTCTCGTTTTCTCCTGTATGGGAGCTGCTTACGGTACTGCAAAAAGTGGTGTTGGAGTTGCATCCATGGGTGTCATGAGACCTGAGCTCGTGATGAAATCAATTGTGCCCGTTGTCATGGCTGGTGTGTTGGGTATCTATGGTTTGATCATTGCGGTTATTATCAGCACTGGGATTAACCCTAAGGCCAAATCTTACTATCTCTTTGATGGCTATGCTCACCTTTCTTCTGGTCTCGCTTGTGGCCTCGCTGGCCTCTCTGCTGGCATGGCCATTGGCATCGTAGGAGATGCTGGTGTTAGAGCAAATGCCCAACAGCCAAAGCTTTTTGTCGGAATGATTCTGATTCTCATCTTTGCTGAGGCACTGGCATTATACGGTCTCATTGTTGGCATCATCCTCTCTTCACGTGCCGGCCAATCCAGAGCCGACTAA 558 0.4875 MQKVEESEIGDVERIQSYYYTMAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0440 185 SUPERFAMILY F1F0 ATP synthase subunit C 107 176 IPR035921 -
Aev05g0440 185 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 33 141 IPR011555 GO:0033179|GO:0046961|GO:1902600
Aev05g0440 185 Pfam ATP synthase subunit C 37 96 IPR002379 GO:0015078|GO:0033177|GO:1902600
Aev05g0440 185 Pfam ATP synthase subunit C 117 175 IPR002379 GO:0015078|GO:0033177|GO:1902600
Aev05g0440 185 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 23 185 - -
Aev05g0440 185 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 23 185 - -
Aev05g0440 185 CDD ATP-synt_Vo_c_ATP6C_rpt2 109 176 - -
Aev05g0440 185 SUPERFAMILY F1F0 ATP synthase subunit C 34 97 IPR035921 -
Aev05g0440 185 CDD ATP-synt_Vo_c_ATP6C_rpt1 33 100 - -
Aev05g0440 185 Gene3D - 31 182 IPR035921 -
Aev05g0440 185 PRINTS Vacuolar ATP synthase 16kDa subunit signature 127 153 IPR000245 GO:0033179|GO:0046961|GO:1902600
Aev05g0440 185 PRINTS Vacuolar ATP synthase 16kDa subunit signature 50 74 IPR000245 GO:0033179|GO:0046961|GO:1902600
Aev05g0440 185 PRINTS Vacuolar ATP synthase 16kDa subunit signature 154 177 IPR000245 GO:0033179|GO:0046961|GO:1902600
Aev05g0440 185 PRINTS Vacuolar ATP synthase 16kDa subunit signature 76 100 IPR000245 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0440 Aev-Chr5 3063907 3069128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0440 22 185 Primary Pumps ATPases(2) AT2G16510 98.171 1.45e-110 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0440 K02155 - gmx:100776231 287.73