Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0439 ATGATGGAGTCGTGTGTCCCACCGGGGTTTCGGTTCCACCCAACGGATGAAGAGCTTGTTGGTTACTATCTCAGGAAGAAAGTCGCATCTCAGAAGATTGACCTTGACGTTATCAGAGAGATCGATCTATATCGTATCGAACCATGGGATCTCCAAGAGAGATGCAGGATCGGGTACGAAGAACAGAACGAATGGTACTTCTTTAGCCACAAAGATAAGAAGTATCCGACAGGGACAAGAACGAACAGAGCCACCATGGCTGGGTTCTGGAAGGCAACGGGAAGGGATAAAGCGGTGTACGACAAGGCCAAGCTCATTGGGATGAGGAAGACCCTTGTCTTCTACAAAGGGAGAGCGCCTAATGGGCAGAAAACTGATTGGATCATGCACGAATACAGACTTGAATCCGACGACAATAATGCACCTCCTCAGGAGGAAGGGTGGGTAGTGTGCAGGGCATTCAAGAAAAGGACGAACAGTGGGCAAACAAAGGCAATGGTGGAAGGATGGGATCCAAGCTACTTGTATGAGGAAGCAAGTGGGGTCAGCAGCACAGTGGTTGACCACCTAATCTCCTCCTCATCCTCATCAAGGCACCACCAACACCTTCCTCATCATCAGAGTATCTTTTTAGCCCAAACTAGTTTCATGTGCAAGCAAGAGACAGACCATAACAACAACAGCAGCTTAATGCATGGATCAGATGATCAGCATCAATTTATACAGCAGCTTCCTCAGCTACAAAGCCCAACTCTGCCTCTAGTCAAGAGCCCCCCACTTGTTAGCACCCTAGTCTCACAAAACAACCACCATGAAGATGATCAGAGCAGAATATTACTATTATCCAATAATAATAATAATAGTAATTGCAACAACAACGATGACAATAATGGCAGTAGTAACAGGATGAGCTCGTCGAGGCAAGTAGTGACGGCTGATTGGAGGGACCTCGACAAGTTTGTGGCTTCTCAACTTATGAGTCAAGGAGATCACGGGGGGATGAATAATGAGTTGTTGTTAGCTGAAGAAGGGCTTCCAAGCTTTGAAACCAGCACCTCCGACATGGCGCTGCTGCTGCTGCAACACCAGAATAGTAATGAAGGCAACAACAACAATAACAAGTTAAGCCCGTTTTTAAGTGCAGCAGGTTCTGACTGTGATATTGGGATATGTGTGTTTGAAAAATAA 1188 0.463 MMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDDNNAPPQEEGWVVCRAFKKRTNSGQTKAMVEGWDPSYLYEEASGVSSTVVDHLISSSSSSRHHQHLPHHQSIFLAQTSFMCKQETDHNNNSSLMHGSDDQHQFIQQLPQLQSPTLPLVKSPPLVSTLVSQNNHHEDDQSRILLLSNNNNNSNCNNNDDNNGSSNRMSSSRQVVTADWRDLDKFVASQLMSQGDHGGMNNELLLAEEGLPSFETSTSDMALLLLQHQNSNEGNNNNNKLSPFLSAAGSDCDIGICVFEK* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0439 395 MobiDBLite consensus disorder prediction 281 308 - -
Aev05g0439 395 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Aev05g0439 395 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Aev05g0439 395 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 331 - -
Aev05g0439 395 PANTHER - 5 331 - -
Aev05g0439 395 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Aev05g0439 395 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0439 Aev-Chr5 3048138 3050044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0439 2 394 NAC Transcription Factor Family AT2G18060 56.576 5.93e-140 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev05g0439 NAM 3.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0439 - - tcc:18610798 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0439 05 3048138 3050044 Aev05g0439 05 3048138 3050044 ECH