Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0437 ATGTCTACCTCAGCCGGAGAAGTTGAAGCTCCCGCCGTCGAGAAACCGACGGAGGAGGTGAAAGCGCCGGAGCAGCCCAAGGCCAAGCCCGCTAAGGAGAAGAAGCCCAAGGTTCCTAAAGAGAAGAAGCCTAAGCAGCCAAAAACAGCCTCTCACCCTCCATATTTTCAGATGATTAAGGAGGCGTTGCTGGCTCTGAAGGAGAGAGGAGGTTCGAGCCCTTACGCAATAGCGAAGTACATGGAAGAGAAGCACAAGGCGGTGCTTCCTGCGAATTTCAGGAAGATTCTGGCGTTGCAGCTGAAGAACCAAGCCGCGAGAGGGAAGCTCGAAAAGATCAAGGCCTCATACAAGCTATCTGAGACTGCGAAGAAGGAGAAAAAGGAAAGCGCCGTCGCCAAGGCCCCAAAAACCACCGTGCCAAAGGAGAAGCAGCGCCCTAAACGAACCAGAGCCGTTGCTGCAACCGCCACCGCTGCTCCTAAGAAGAGCAAGAAAACAGAGAAAGCTGCAAAAGGAGCGAAGAAGGTTGGTGTGAAGAAGACGACAAAGACGAAGAAGATATCGACTCCTGCGAAGCCCAAACAGCCCAAGTCCATTAAGTCTCCGGCCAAGAGGGCCCGGAAGGTTACTGCTGCGGCATGA 645 0.538 MSTSAGEVEAPAVEKPTEEVKAPEQPKAKPAKEKKPKVPKEKKPKQPKTASHPPYFQMIKEALLALKERGGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNQAARGKLEKIKASYKLSETAKKEKKESAVAKAPKTTVPKEKQRPKRTRAVAATATAAPKKSKKTEKAAKGAKKVGVKKTTKTKKISTPAKPKQPKSIKSPAKRARKVTAAA* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0437 214 CDD H15 49 128 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev05g0437 214 PRINTS Histone H5 signature 136 150 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev05g0437 214 PRINTS Histone H5 signature 65 82 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev05g0437 214 PRINTS Histone H5 signature 38 59 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev05g0437 214 PRINTS Histone H5 signature 192 211 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev05g0437 214 SUPERFAMILY "Winged helix" DNA-binding domain 48 130 IPR036390 -
Aev05g0437 214 PANTHER HISTONE H1 5 212 - -
Aev05g0437 214 Gene3D - 46 132 IPR036388 -
Aev05g0437 214 MobiDBLite consensus disorder prediction 1 56 - -
Aev05g0437 214 MobiDBLite consensus disorder prediction 120 214 - -
Aev05g0437 214 MobiDBLite consensus disorder prediction 120 150 - -
Aev05g0437 214 Pfam linker histone H1 and H5 family 52 118 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev05g0437 214 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 51 121 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev05g0437 214 SMART h15plus2 49 116 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev05g0437 214 MobiDBLite consensus disorder prediction 12 37 - -
Aev05g0437 214 PANTHER HISTONE H1 5 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0437 Aev-Chr5 3029518 3030285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0437 38 119 Single Myb Histone (SMH) Gene Family AT1G72740 40.244 1.17e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0437 K11275 - gmx:100500169 192.2