Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0434 ATGAAGCGGTCAAGGAAATCGAACCGGGTTTCGTGGGCTCCTGCATCTAATCTGTGTCAGGTAAAATTGTTCTTATCTGAGGATTGCCCTTCAAAAGTTGGCCTCAAATTTCAAGATCATCTTCAAGCAAAGACATCACCAGTGTTGCCTTATAGTACTAATGAGTATGTTGATTTACCTCCTGGGTTTGAAGACAATCACTTCCTGAATCAGTCAAAGCTGGACCTCTCTCACATTTCTCCGATAAAATGGGAATGCCCTGCCCAGATTACTTTGAGTCATCATTGGTGCGTTGCAGCTGGTGAAGAAAGTAAGGAGAAATTTGATCAAAGGCTAAGAGAAATGAAAGTGCTTGAAGCTTATTACCCTCGTCTTTCTGCCATTCCTCCTAGTCCATCTGTTTCTTATGAAGTAGAGAAGGAAAATTATGACGATAACCACACTGCCGTCATCCCTATCATTCCCATTGAGGAAGAAGATTCAATATTGGTGGATATTAATCCTGAAGTAGCAGTCACAAAACATTCAGACACTCCCACCAGTTTGCAGTCACAAAACTTGCAGAAGTATATATCAACTACATCTCCCATTACTCCACAATCCAGTACCTCCTCTAGTGTTCCCTTATCTGCCGGTGGGAAACCGGTGCCTGTTTCTGCTGGAGCGGACCCAGATTTAGCTGCAGCTTCTGCTCTTTTAGCAGCAGCCATCATGAAGAATAATGAGCAAGGAAACCCAATCGATATGGATCTACTTGTTAAAATCTTTAATGACCCAACAGTGGTTGAGCAATTGGTTCACCAACGTGGAACTGCGGCTACTGCCATGACTGCATCCTCAAATGCTATGGCTATACTTACTGCTGGGTTGAAGCCTGCTTCTTTTTCAGCTCCATTGTCTAAACCTACCCACGGTGAGGCGGTTTCTAGGAGTACACACTCAAGTACAGCGGGTTTAGTACCTGCTTCTGGGCCAAAGCAAGCAACTCCATTGAGTTCCTTGTTGATGCCTACTTCAAATACGCCTGCAATCCCATCAGTTCCATTTTCTTCTAGGCTAGCAACTCCCTCAGTTACACTGCCCACAGCACCAACTACACCTTCACCTCCACCTCCACCTCCAACCGCAGCTGCACCTCATATGCACAGGCCCATCGACCAAACTGTTCGCCATGTGTCAAATGCAGTGTTGCCCTCTTTTGATATTCAGCCTCCTCAGCAAGATACAGTTTTGTTATCTGGTACAAAGCGAGCGGCACCATTGCCGTCTGTTTCTTCCAATGAGTTCAGCACAGTGCCATTGCATTTAGCTGCTGTGAACTCGCATGCAGCGCCGCCTCATCAACCGAGTAATGGTCCAGCATTTGCAGTGAAGGATGCCAACTATTTTAAGAACCTAATTAGGCAACATGGTGCAGATGCGCAGGACTCTCTAATAGGTATCAACCATAATAACTTCCAAGACTTGAAACCGGTACATAACAACAACTTTAAACAAAGGGAACAACAGATATACAAAAACCAGAAACCTTGCGTATACTTTAATAGCTCAAGGGGTTGCCGAAATGGTTCAAATTGCCCATATCAGCATGATATGGTAGCTCAGTGGGGAGCTGGTAATGCCCTTTTGACCCAAAATGCTAAAAGAATGAAACTTGGACCGGAAATTAATGGGAGGATATAA 1683 0.4462 MKRSRKSNRVSWAPASNLCQVKLFLSEDCPSKVGLKFQDHLQAKTSPVLPYSTNEYVDLPPGFEDNHFLNQSKLDLSHISPIKWECPAQITLSHHWCVAAGEESKEKFDQRLREMKVLEAYYPRLSAIPPSPSVSYEVEKENYDDNHTAVIPIIPIEEEDSILVDINPEVAVTKHSDTPTSLQSQNLQKYISTTSPITPQSSTSSSVPLSAGGKPVPVSAGADPDLAAASALLAAAIMKNNEQGNPIDMDLLVKIFNDPTVVEQLVHQRGTAATAMTASSNAMAILTAGLKPASFSAPLSKPTHGEAVSRSTHSSTAGLVPASGPKQATPLSSLLMPTSNTPAIPSVPFSSRLATPSVTLPTAPTTPSPPPPPPTAAAPHMHRPIDQTVRHVSNAVLPSFDIQPPQQDTVLLSGTKRAAPLPSVSSNEFSTVPLHLAAVNSHAAPPHQPSNGPAFAVKDANYFKNLIRQHGADAQDSLIGINHNNFQDLKPVHNNNFKQREQQIYKNQKPCVYFNSSRGCRNGSNCPYQHDMVAQWGAGNALLTQNAKRMKLGPEINGRI* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0434 560 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 552 - -
Aev05g0434 560 MobiDBLite consensus disorder prediction 297 378 - -
Aev05g0434 560 MobiDBLite consensus disorder prediction 194 210 - -
Aev05g0434 560 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 552 - -
Aev05g0434 560 MobiDBLite consensus disorder prediction 362 378 - -
Aev05g0434 560 MobiDBLite consensus disorder prediction 194 216 - -
Aev05g0434 560 MobiDBLite consensus disorder prediction 305 361 - -
Aev05g0434 560 ProSiteProfiles Zinc finger C3H1-type profile. 505 533 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0434 Aev-Chr5 3010742 3015482 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev05g0434 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0434 - - adu:107488052 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0434 05 3010742 3015482 Aev05g0434 05 3010742 3015482 ECH