Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0432 ATGCCTGCCCTACTATTTCTTCAGCGACCCAACCTAACTTATGTGCTCCTACACACAATCTTTAGTGGTTTTCAGATTTTGAAAACAACCTCACACAGTTGCCGCAGAGAGAGAGAGAGAGAGAGAGAGAGCGCCATGGGAAGAGTCATCCGAGCACAGCGTAAGGGTGCTGGGTCCGTCTTCAAGTCCCACACCCACCGCCGCAAGGGCGCCGCTAGGTTCCGCAGCCTCGACTTCGGCGAGCGCAACGGTTACCTCAAGGGTGTCGTCACCGACATCATCCACGACCCTGGTCGCGGTGCACCCTTGGCCAAGGTTACCTTCCGCCACCCCTTCAGGTACAAGAAGCAGTCCGAGCTCTTCGTTGCCGCCGAAGGAATCTACACTGGACAGTTCATCTACTGCGGTAAGAAGGCCACCCTTGTCGTCGGAAATGTGCTTCCTCTCAGATCTATCCCTGAAGGAGCTGTAATTTGCAACGTCGAGCACCATGTTGGTGACCGCGGTGTCTTCGCTAGGGCTTCTGGTGATTACGCCATTGTTATCAGCCACAACCCCGATAACGACACCTCTAGGATCAAGCTTCCATCTGGTTCCAAGAAGATAGTTCCAAGTGGTTGCAGGGCCATGATTGGACAAGTTGCTGGAGGTGGAAGAACAGAGAAGCCGATGCTCAAGGCAGGTAATGCTTACCACAAGTTCAGGGTGAAGAGGAACTGCTGGCCTAAGGTTCGTGGTGTGGCCATGAACCCAGTTGAGCATCCTCACGGTGGTGGTAACCACCAACACATTGGGCACGCCAGTACTGTCAGGCGCGATGCTCCTCCAGGGCAAAAGGTTGGTCTCATTGCTGCCAGGAGGACTGGTCGTCTCAGAGGACAAGCTGCTGCAACCGCTGCTAAGGCTGATAAGACCACTTGA 921 0.5451 MPALLFLQRPNLTYVLLHTIFSGFQILKTTSHSCRRERERERESAMGRVIRAQRKGAGSVFKSHTHRRKGAARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAKVTFRHPFRYKKQSELFVAAEGIYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKTT* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0432 306 Pfam Ribosomal Proteins L2, C-terminal domain 143 270 IPR022669 GO:0003735|GO:0005840|GO:0006412
Aev05g0432 306 Hamap 50S ribosomal protein L2 [rplB]. 46 291 IPR023672 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Aev05g0432 306 SMART Ribosomal_L2_C_2 141 276 IPR022669 GO:0003735|GO:0005840|GO:0006412
Aev05g0432 306 Pfam Ribosomal Proteins L2, RNA binding domain 58 135 IPR022666 GO:0003735|GO:0005840|GO:0006412
Aev05g0432 306 Gene3D - 135 214 IPR014722 -
Aev05g0432 306 PANTHER RIBOSOMAL PROTEIN L2 46 304 IPR002171 GO:0003735|GO:0005840|GO:0006412
Aev05g0432 306 PIRSF RPL2p_RPL2a_RPL8e_RPL2o 19 300 IPR002171 GO:0003735|GO:0005840|GO:0006412
Aev05g0432 306 SUPERFAMILY Translation proteins SH3-like domain 144 291 IPR008991 -
Aev05g0432 306 Gene3D - 46 131 IPR012340 -
Aev05g0432 306 SUPERFAMILY Nucleic acid-binding proteins 47 141 IPR012340 -
Aev05g0432 306 ProSitePatterns Ribosomal protein L2 signature. 242 253 IPR022671 GO:0003735|GO:0005840|GO:0006412
Aev05g0432 306 Gene3D Ribosomal protein L2, domain 3 215 292 IPR014726 -
Aev05g0432 306 MobiDBLite consensus disorder prediction 255 275 - -
Aev05g0432 306 PANTHER 60S RIBOSOMAL PROTEIN L8 46 304 - -
Aev05g0432 306 SMART Ribosomal_L2_2 56 135 IPR002171 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0432 Aev-Chr5 2992475 3003949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0432 46 303 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 94.186 0.0 504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0432 05 2992475 3003949 Aev05g0432 05 2992475 3003949 ECH