Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0431 ATGGCTAATAATAGGAAGTCGAATAAAGTGGCACAAGCAGTTGTTCTGAAGCAGATTCTGAAGAGGTGTTCGAGTTTTGGGAAGAAACAGAGCTACAACGATGAAGAGGGTCTACCTGATGATGTTCCAAAAGGGCATTTTGCTGTGTATGTTGGGGAGAACAGGACAAGATACATCATCCCTATATCATGGCTTGCTCATCCACGGTTCCAGATTCTGCTTCAGAGAGCGGAGGAGGAGTTTGGTTTCAACCATGATATGGGCCTTACTATTCCTTGTGATGAACTTGCTTTTCAGTCCCTAACTTCAATCATAAGATGA 321 0.433 MANNRKSNKVAQAVVLKQILKRCSSFGKKQSYNDEEGLPDDVPKGHFAVYVGENRTRYIIPISWLAHPRFQILLQRAEEEFGFNHDMGLTIPCDELAFQSLTSIIR* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0431 106 Pfam Auxin responsive protein 18 104 IPR003676 GO:0009733
Aev05g0431 106 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 106 - -
Aev05g0431 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0431 Aev-Chr5 2987126 2987446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0431 5 106 Calmodulin-binding Proteins AT3G43120 42.308 1.27e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0431 K14488 - gmx:100798840 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0431 05 2987126 2987446 Aev08g0209 08 1167609 1167932 ECH
Aev08g0209 08 1167609 1167932 Aev05g0431 05 2987126 2987446 ECH
Aev07g0697 07 4467640 4467939 Aev05g0431 05 2987126 2987446 ECH
Aev05g0431 05 2987126 2987446 Aev05g0431 05 2987126 2987446 ECH
Aev04g3424 04 32816110 32816430 Aev05g0431 05 2987126 2987446 ECH