Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0422 ATGGATCAGTGGAAGAAGCCTAAAGATTTGTCGAAAACCTCATCCACTGCGACGGATTCAGCACCATCTCACTCTCAGCTCAACGCTACTGTCACCTCTAACTCTAGTCGCTTTCACGACCCCAGTAGGGTGAGGGGTGAAGTGGAAGCGCAGGATCCAGCTGCTGCAAGAAAAGTTCAGAAGGCTGATCGCGAGAAACTGCGGCGGGATCGATTAAACGAGCACTTCCATGACTTGGCCAACACATTAGACCCTGATAGGCCTAGGAATGACAAGGCAACTATCCTTACTGATACTATCCAAATGCTTAAGGATTTGACTGCTGAAGTCAATAGGCTGAAAACAGAGCATAGAGCGCTCTCTGACGAGTCGCGCGAACTAATGCAAGAGAAGAATGAACTCAGAGAAGAGAAGGTGTCTTTGAAATCTGATATAGATAACCTTAATGCACAGTATCAACAGAGAGTCAGAATCATGCTCCCATGGACTGCAATTGACCACTCTGTCGTCATGGCTCCACCTTTTTCATATCCGGTTCCTATACCTATTTCTCCTGCTCCCATGTCCATTCACCCGACCCTTCAACCTTTTCCTTTCTTTGGAAGTCAAAATCCTGCTCACATTCATACTCCTTGTTCAAATTATGTCCAATTCTCTGCTCCAGCTAATCCTTCGGTTGAGCTGCCATCGGCCCAGTATGCTTCCTCGTCCCATGTGCCTAGCCAAAAAGAATCCCAGAGCAAGTCTCCTCCTAGTCATAGAAGGATCAGTGATGATGACAGATGCAGCGAGTCTCATGAGGTGGCTACAGAGCTTGAACTTAAGATGCCTGGATCATCAACTCAGGAGGATTCCACCTCTGCAGGAAGGAAGGGCAAGCATTCAGCGAGGAAGGATAGGATCATTCCAGATGGAAGCACATCAAGCGGGTATTCTCCATCTCAAGGACTTCAAGATAGCTCCAACAGCGTGGGCAACGTCCCAAAGGCTGATAACTGA 999 0.4775 MDQWKKPKDLSKTSSTATDSAPSHSQLNATVTSNSSRFHDPSRVRGEVEAQDPAAARKVQKADREKLRRDRLNEHFHDLANTLDPDRPRNDKATILTDTIQMLKDLTAEVNRLKTEHRALSDESRELMQEKNELREEKVSLKSDIDNLNAQYQQRVRIMLPWTAIDHSVVMAPPFSYPVPIPISPAPMSIHPTLQPFPFFGSQNPAHIHTPCSNYVQFSAPANPSVELPSAQYASSSHVPSQKESQSKSPPSHRRISDDDRCSESHEVATELELKMPGSSTQEDSTSAGRKGKHSARKDRIIPDGSTSSGYSPSQGLQDSSNSVGNVPKADN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0422 332 MobiDBLite consensus disorder prediction 248 271 - -
Aev05g0422 332 PANTHER TRANSCRIPTION FACTOR BHLH121 32 331 IPR044579 GO:0003700|GO:0055072
Aev05g0422 332 CDD bHLH_AtILR3_like 61 135 - -
Aev05g0422 332 PANTHER TRANSCRIPTION FACTOR BHLH11 32 331 - -
Aev05g0422 332 MobiDBLite consensus disorder prediction 287 301 - -
Aev05g0422 332 MobiDBLite consensus disorder prediction 1 70 - -
Aev05g0422 332 Pfam Helix-loop-helix DNA-binding domain 57 106 IPR011598 GO:0046983
Aev05g0422 332 MobiDBLite consensus disorder prediction 227 332 - -
Aev05g0422 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 124 IPR036638 GO:0046983
Aev05g0422 332 Coils Coil 96 151 - -
Aev05g0422 332 MobiDBLite consensus disorder prediction 305 332 - -
Aev05g0422 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 56 106 IPR011598 GO:0046983
Aev05g0422 332 SMART finulus 62 112 IPR011598 GO:0046983
Aev05g0422 332 MobiDBLite consensus disorder prediction 10 39 - -
Aev05g0422 332 Gene3D - 55 157 IPR036638 GO:0046983
Aev05g0422 332 MobiDBLite consensus disorder prediction 40 70 - -
Aev05g0422 332 MobiDBLite consensus disorder prediction 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0422 Aev-Chr5 2908703 2910234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0422 46 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 53.516 1.08e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g0422 HLH 1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0422 - - adu:107487484 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0422 05 2908703 2910234 Aev05g0422 05 2908703 2910234 ECH
Aev04g3555 04 33569093 33570479 Aev05g0422 05 2908703 2910234 ECH