Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0396 ATGACTCTCAAAAGCTTAGTATCACTTGTCTTTAATTTGATTGGTCTGAGCAAGGATGACCCTTCTTTACCATTCCTCATTGTCCCACAAAAGATCAATAATCAGCAAATATCTGAATCAGCATCAGCCAATCTAATGGACCAGAGTGGTGAGGTTGTATGGTGTTGCGTGTGCTTGTCGAGGTTAAAGGACAAGGATGAAATCCGTGTTCTTCCTTGCTTGCACAAATTCCATAAGATCTGTGTAAATAGATGGCTCAAGGGTCACCACAAGACTTGTCCACTCTGCCGTTTCTCCATGGGAGGCGAGGAGACCTCTCGCCGTGCCGAGATGTTCACGGAGGAGATGTTGATATGGTTTTCTTCTTTCCATATTGCTGGTATGTAA 387 0.4393 MTLKSLVSLVFNLIGLSKDDPSLPFLIVPQKINNQQISESASANLMDQSGEVVWCCVCLSRLKDKDEIRVLPCLHKFHKICVNRWLKGHHKTCPLCRFSMGGEETSRRAEMFTEEMLIWFSSFHIAGM* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0396 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 103 IPR013083 -
Aev05g0396 128 Pfam Ring finger domain 55 97 IPR001841 -
Aev05g0396 128 PANTHER TARGET OF ERK KINASE MPK-1 33 113 - -
Aev05g0396 128 SUPERFAMILY RING/U-box 54 100 - -
Aev05g0396 128 CDD mRING-H2-C3H2C2D_ZSWM2 55 97 - -
Aev05g0396 128 PANTHER GB|AAF27103.1 33 113 - -
Aev05g0396 128 ProSiteProfiles Zinc finger RING-type profile. 55 97 IPR001841 -
Aev05g0396 128 SMART ring_2 55 96 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0396 Aev-Chr5 2761819 2762205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0396 49 106 C3H Transcription Factor Family AT1G80400 46.552 7.68e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0396 - - gmx:100527665 186.422