Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0387 ATGGAGTTCGTGCCAAATCCGTGCCCTTTTCGTTCCCCACTGTTCGGTTCCTTTGGGAATCTCGTTGAGAGGGTTAAGCAGATTGGAACCCTCGCAGTTTCTGCGGTCCTTGGAAACATCTTCTCCGCGATCTTGACCTTTTGCTTCGCATTAGTGGGCACTTTGTTGGGAGCTATGACAGGTGCTCTGATAGGCCAAGAGACAGAGAGTGGCTTCATTCGGGGTGCTGCTGTTGGTGCCATATCTGGAGCTGTTTTCTCCATTGAAGTGTTTGAATCCTCTCTTGTTCTTTGGCAATCCGATGAGTCTGGAATTGGGTGTCTCTTATACCTGATTGATGTTATTGCTAGCTTATTGAGTGGGAGACTTGTGCGCGAGAGGATCGGTCCAGCCATGTTGAGTGCTGTTCAAAGTCAGATGGGTGCTGTTGAAACCAGCTTTGATGAGGTTCAAAATCTCTTTGACACCGGTGGCTCAAAGGGTTTATCCGGTGACTCCGTTGAGAAAATCCCAAAAATCAAAATTACTAGTGACAACAACATTGATGCTTCTGGTGAAAGAGTTTCTTGCTCAGTTTGCCTTCAGGACTTTCAGCTTGGTGAGATAGTTAGAAGCTTGCCTCATTGTCATCACATGTTTCACCTACCTTGCATAGATAAGTGGCTCTTCAGGCATGGTTCTTGCCCATTATGCAGAAGGGATCTGTAA 708 0.4661 MEFVPNPCPFRSPLFGSFGNLVERVKQIGTLAVSAVLGNIFSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETSFDEVQNLFDTGGSKGLSGDSVEKIPKIKITSDNNIDASGERVSCSVCLQDFQLGEIVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0387 235 CDD RING-H2_PA-TM-RING 190 232 - -
Aev05g0387 235 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 17 235 IPR044523 -
Aev05g0387 235 SUPERFAMILY RING/U-box 189 235 - -
Aev05g0387 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 235 IPR013083 -
Aev05g0387 235 SMART ring_2 190 231 IPR001841 -
Aev05g0387 235 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE, YMGG-LIKE GLY-ZIPPER-RELATED 17 235 - -
Aev05g0387 235 Pfam Ring finger domain 189 232 IPR001841 -
Aev05g0387 235 ProSiteProfiles Zinc finger RING-type profile. 190 232 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0387 Aev-Chr5 2705300 2706960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0387 20 235 C3H Transcription Factor Family AT5G66070 78.241 2.32e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0387 - - gmx:100807641 429.869