Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0352 ATGGCTTGCCTGAGCCACCACCGCCACCGATGGGTTCCTCTTCCCGACATGCTCTCCGGAGACCGTTTGCCCCTCCACCACCGCCGCCACCGTGACAGCGCTGGAGACGACGACGACGACGACGGTGGACCCAAGTGCTGCCCCTCGCTCCCTTCTTCCGCGTATCGATTGGAGAAGGTGTTCCCAGTTTACGCCATGTGCGTGCCTGACCCGGATTCTGGGTCCGTATTAGACGGGTCTGACCCGATTTGGGACGCTGTCAGACAAGAAGCTAAGCTGGAGGCAGAAAAAGAGCCGATTTTGAGCAGCTTTTTGTATGCTAGTATTCTATCTCATGATTGCTTGGAGCAAGCGTTGGCGTTTGTCGCTGCCAATCGTCTCCAAAGCCCTACCCTTTTGGCTACTCAGCTGATGGATATATTTTGCAATGTGATTATGAATGACAAAGATATTCAGCGATCGATTCGCCTTGATGTCCAGGCATTCAAAGATAGGGACCCTGCTTGTTTGTCATATTGCTCAGCAATTTTGTATATGAAGGGTTACCATTCTCTGCAAGTGCATCGAATAGCCCATGCATTGTGGCGCCAGGGACGCAAAATCTTGGCCTCTGCTTTGCAAAGTCGAGTCAGTGAGGTTTTTGGGGTCGACATTCATCCCGCTGCCAAAATTGGGGAGGGAATTTTATTAGATCATGGGACAGGCGTGGTTATTGGTGAAACTGCTATTGTTGGAAACAGAGTTTCATTAATGCATGGTGTAACATTAGGAGGCTCAGGAAAGGAAACAGGTGACCGACATCCCAAGGTAGGTGAAGGTGTGCTAATTGGAGCTAGTGCAACTATACTTGGGAATATAAGAATTGGCGAAGGTTCGATGATAGCTGCTGGATCCCTCGTGTTAAAAGAGGTCCCTCCCCACAGCATTGTGGCAGGAATACCGGCAAATGTCATTGGAGGTCTACATGAGCGTGACCCATCTCTAACTATGAAGCATGATGCTACAAAAGATTTTTTCACAAATGTAGCTACTAACTTTAAAGAAGAAAAGACCAATGGAGCACAGAATCCAGATAGAAATGATGTGAGCAATTGA 1095 0.4858 MACLSHHRHRWVPLPDMLSGDRLPLHHRRHRDSAGDDDDDDGGPKCCPSLPSSAYRLEKVFPVYAMCVPDPDSGSVLDGSDPIWDAVRQEAKLEAEKEPILSSFLYASILSHDCLEQALAFVAANRLQSPTLLATQLMDIFCNVIMNDKDIQRSIRLDVQAFKDRDPACLSYCSAILYMKGYHSLQVHRIAHALWRQGRKILASALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGSGKETGDRHPKVGEGVLIGASATILGNIRIGEGSMIAAGSLVLKEVPPHSIVAGIPANVIGGLHERDPSLTMKHDATKDFFTNVATNFKEEKTNGAQNPDRNDVSN* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0352 364 SUPERFAMILY Trimeric LpxA-like enzymes 78 331 IPR011004 -
Aev05g0352 364 Pfam Bacterial transferase hexapeptide (six repeats) 267 300 IPR001451 -
Aev05g0352 364 Gene3D serine acetyltransferase, domain 1 67 216 IPR042122 -
Aev05g0352 364 SMART SATase_N_2_a 83 187 IPR010493 GO:0005737|GO:0006535|GO:0009001
Aev05g0352 364 TIGRFAM cysE: serine O-acetyltransferase 155 315 IPR005881 GO:0005737|GO:0006535|GO:0009001
Aev05g0352 364 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 276 304 IPR018357 GO:0016740
Aev05g0352 364 PANTHER SERINE ACETYLTRANSFERASE 53 347 - -
Aev05g0352 364 Pfam Serine acetyltransferase, N-terminal 83 186 IPR010493 GO:0005737|GO:0006535|GO:0009001
Aev05g0352 364 Gene3D Hexapeptide repeat proteins 217 345 - -
Aev05g0352 364 CDD LbH_SAT 214 314 IPR045304 -
Aev05g0352 364 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 53 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0352 Aev-Chr5 2516863 2520928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0352 57 353 Miscellaneous Gene Families AT2G17640 71.237 1.68e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0352 K00640 - gmx:100775449 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0352 05 2516863 2520928 Aev05g0352 05 2516863 2520928 ECH
Aev05g0352 05 2516863 2520928 Aev01g0124 01 1024073 1027335 PCT