Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0349 ATGGCCATTTCTAACGAGAACAGTTCTAACTCGATGAACCCCACTAATGTCCAAGGAGGTTTGGGTCATATGGGTGCCAGAAAATTTGGGCATAGCAGAAGAGCATTGGGCGTGATTAATCAGAATCTGGTGGAAGGAAGACCCCCTTGTGTTGTTAATAAGAGGGCCTTGGCAGATAAACATGAAGTTTGTGAGAAGAAGCAGGCGGATCCGGTGCATCGACCTATCACAAGGAGGTTTGCTGCACAAGCCAGAATACACCAACCTCCAATTGAGCAAACCAAGAGATCAAATCAGTTCGGAGATTTTATACTAATCGATGATGAACTCAAGTCGACAGAGGACCAGCCTGTGCCCATGTCACTAGAGCAAACAGAACAAATGCAGAGTGAACTAGATCAGATGGAGGAAGTTGAGATGGAGGATATAGATGTTGATGAGCCTCTTTTGGACATTGATAGCTTTGATGCCAATAATCCTCTTGCAGTTGCTGACTATATTGAAGAACTTTATGCTCACTACAAAAAATTGGAGTGTACTGGCTGTGTCTCACCGAATTATATGGCACAACAATTTGACATTAATGAAAGGATGAGGGCTATACTGGTTGACTGGCTGATTGAGGTTCATGACAAATTCGACCTCATGCATGAGACATTGTTCCTCACTGTTAATCTTATAGATAGGTTTTTGGCAAAGCAGGCAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTTTGGTTGCCATGCTTTTGGCATGCAAGTATGAGGAGGTTTCTGTGCCTGTGGTTGGAGATCTCATCCTCATATCAGACAAAGCATACACAAGGACTGAAGTTCTGGACATGGAGAAGTTGATGCTCAACACATTGCAGTTTAACATGTCAGTGCCAACAACTTATGTTTTCATGAAAAGGTTCCTAAAGGCTGCTCAAGCAGACAGAAAGCTTGAGCTTCTGGCTTTCTTCTTGGTAGAGCTATCTCTGGTGGAGTATGAGATGCTCAAGTTCCCACCATCTTTGCTAGCTGCAGCCGCAGTCTACACCGCTCAATGCACTACCTATGGTTTCAAGCAGTGGAGCAAGACATGTGAATGGCACACAAACTACACAGAAGAGCAGCTATTAGAGTGCTCTGGTTTGATGGTTGGTTTCCACCAAAAGGCTAAGACAGGGAAGCTAACAGGGGTACATAGGAAGTACTGCTCATCAAAATATTGCTATACTTCAAAATGTGAACCAGCAAGTTTTCTTCTTGTTGATGACAACTCATTGTTGTAG 1278 0.4351 MAISNENSSNSMNPTNVQGGLGHMGARKFGHSRRALGVINQNLVEGRPPCVVNKRALADKHEVCEKKQADPVHRPITRRFAAQARIHQPPIEQTKRSNQFGDFILIDDELKSTEDQPVPMSLEQTEQMQSELDQMEEVEMEDIDVDEPLLDIDSFDANNPLAVADYIEELYAHYKKLECTGCVSPNYMAQQFDINERMRAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLAKQAVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRTEVLDMEKLMLNTLQFNMSVPTTYVFMKRFLKAAQADRKLELLAFFLVELSLVEYEMLKFPPSLLAAAAVYTAQCTTYGFKQWSKTCEWHTNYTEEQLLECSGLMVGFHQKAKTGKLTGVHRKYCSSKYCYTSKCEPASFLLVDDNSLL* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0349 425 Gene3D - 170 409 - -
Aev05g0349 425 Gene3D - 183 295 - -
Aev05g0349 425 PANTHER CYCLINS 22 417 IPR039361 -
Aev05g0349 425 MobiDBLite consensus disorder prediction 1 18 - -
Aev05g0349 425 SMART Cyclin_C_2 297 414 IPR004367 -
Aev05g0349 425 SUPERFAMILY Cyclin-like 296 414 IPR036915 -
Aev05g0349 425 SMART cyclin_7 301 383 IPR013763 -
Aev05g0349 425 SMART cyclin_7 204 288 IPR013763 -
Aev05g0349 425 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g0349 425 CDD CYCLIN 295 382 IPR013763 -
Aev05g0349 425 PANTHER CYCLIN-B2-1 22 417 - -
Aev05g0349 425 CDD CYCLIN 198 287 IPR013763 -
Aev05g0349 425 PIRSF Cyclin_A_B_D_E 3 425 IPR039361 -
Aev05g0349 425 Pfam Cyclin, C-terminal domain 297 412 IPR004367 -
Aev05g0349 425 SUPERFAMILY Cyclin-like 158 294 IPR036915 -
Aev05g0349 425 Pfam Cyclin, N-terminal domain 170 295 IPR006671 -
Aev05g0349 425 ProSitePatterns Cyclins signature. 199 230 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0349 Aev-Chr5 2498694 2501399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0349 1 418 Core Cell Cycle Gene Families AT1G20610 57.968 6.66e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0349 K21777 - gmx:100798068 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0349 05 2498694 2501399 Aev05g0349 05 2498694 2501399 ECH