Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0346 ATGGAGAGGAAAAACACATCCTCATCCTCCTCCAACTCCAAGAATAAGAAGGGCAACAATGCCAATACTACTCCTACTAGTAGGTCCCCTTCTCCTCCTTTGAAAACCCCCGAGGAAGTCCTTGCTGATTTATCACCACCGCCACCATTTGATTATGACAACAATAACAACAACACTAATATTGCTAGTGTTGTTGGTGGGGGTAGTTCATCATCAGTCGGGGTGGCGATGGCGGTTGGTGTTGGTGTTGGTGGTGGTGCAGTAATTAAAAAGAGGAAGGCATCTACAGTGAAGGACCCACCAAAAGGAACACCAACATGCCCAGTGTGCAGCAGAACCTTCTCTAGTTGGAAGGGTGCTTTTGGGCACATGCGCAAGCACCCTGATCGTCAGTACCGTGGCTTCTTCACTCCCCCCACCTTCTCTTCTTCTTCCGCGGCGGCGGGAGGAGAAGATGGTGGCACTTCTTCTGGTGCAGGTGGATCATCCAATGTTCGAGGGCTTCTCATTGATTTGAACAACCCATTGGAGGAGAATAATAGTAATGCTCCTGCACAAGAAGAGAATGAGGCCAATAATAATAATAACAACAAGTTATTAGGGTTTGACTTGAACGAGTTTCCTGCTACTGAAAATGATGATGATGATGATATGATGCCCTAA 663 0.4691 MERKNTSSSSSNSKNKKGNNANTTPTSRSPSPPLKTPEEVLADLSPPPPFDYDNNNNNTNIASVVGGGSSSSVGVAMAVGVGVGGGAVIKKRKASTVKDPPKGTPTCPVCSRTFSSWKGAFGHMRKHPDRQYRGFFTPPTFSSSSAAAGGEDGGTSSGAGGSSNVRGLLIDLNNPLEENNSNAPAQEENEANNNNNNKLLGFDLNEFPATENDDDDDMMP* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0346 220 MobiDBLite consensus disorder prediction 143 220 - -
Aev05g0346 220 ProSitePatterns Zinc finger C2H2 type domain signature. 107 127 IPR013087 -
Aev05g0346 220 MobiDBLite consensus disorder prediction 1 69 - -
Aev05g0346 220 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 80 217 - -
Aev05g0346 220 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 80 217 - -
Aev05g0346 220 MobiDBLite consensus disorder prediction 50 69 - -
Aev05g0346 220 MobiDBLite consensus disorder prediction 1 29 - -
Aev05g0346 220 MobiDBLite consensus disorder prediction 143 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0346 Aev-Chr5 2476677 2477339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0346 101 151 C2H2 Transcription Factor Family AT4G35280 49.020 8.37e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev05g0346 None None None