Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0339 ATGGGTGTTTGTTTGGGTTCACTCACTGGTGGCCGTGAATCACACACTACTACTCACCATTCAGGTTGGGTGAGCAGTAGTGATGAGAGGAAGAGGAAGGTGGGAATAAGTAGCGATAGAAGAAGAAGCAGGGAGCTGCAGGGGAACAAGAGTAGTAGTAGTGGGCATGATCAAGATTGGGAGTGGGAGCAAATATGGAAGAGCAGGAGTGGTACTACTACTACTAGTGCAAGTGGTGGATATTCATCATCACCAAACACCATAGTGACTCACAGTGGGCAGATTCTAGAAACCGCCAACTTGAAGGTCTTCACTTTTGCGGAACTGAAAGCAGCCACCAAGGGTTTCAAGTCGGAGCTTGGTGAAGGTGGATTCGGCAAGGTTTACAAAGGCTGGTTGCATCACTCCACACTCTCCCCTGCTAAAACTCCTAATTCTGCCTCTGCCATGCTTGTCGCTATTAAAAAATTGAACCCCGAAAGCGCCCAAGGATTCCAAGAATGGAAGTCAGAGATAAACTTTTTGGGAAAGATTTCTCACCCAAACTTGGTGAAGCTATTGGGATACTGTTGGGAAAACGAAGAACTTCTCCTTGTGTACGAGTTCATGCCTAAGGGAAGCTTGGAGAATCATCTATTCAGAAGAAACTCCAACATAGAACCACTTTCTTGGAACACTCGTCTCAAAATAGCAATTGGTGCAGCTCGTGGATTGGCTGTGTTGCACACTTCAGAAATGCAAGTCATATACAGAGATTTTAAGGCCTCAAATATATTACTTGATGGGGATTACAATGCAAAAATATCAGATTTTGGGTTGGCTAAATTGGGGCCTGTCGGGGAAGATTCACACGTGACCACCAGAATCATGGGCACCTATGGCTATGCTGCCCCAGAATACATGGCCACAGGGCACTTGTACGTGAAGAGTGACGTGTATGGGTTCGGTGTGGTGCTGCTTGAGATGATGACAGGGCTGAGGGCACTCGACCCAAAGCGGCCACCAGGGCAGCAGAATCTGGTGCTATGGGCTAAGCCATTTCTCTCGGAGAAAAGAAGCCTTAAATCAATTATGGACTCGAAGATGGAAGGACAGTACTCACTCAAAGCAGCATTCCAAGCAGGGCAGCTTGCCCTCAAATGCCTCCAACCTGACCCCAAGAAACGCCCTTCTATGAATGATGTCTTGAAGGCACTCCAAGATATTCAAGCTATCAAATTCAAACATAACAAGAACAATAAGAGTAGGGAATCAAACAAACAACCACGTAACTCTTAA 1278 0.4624 MGVCLGSLTGGRESHTTTHHSGWVSSSDERKRKVGISSDRRRSRELQGNKSSSSGHDQDWEWEQIWKSRSGTTTTSASGGYSSSPNTIVTHSGQILETANLKVFTFAELKAATKGFKSELGEGGFGKVYKGWLHHSTLSPAKTPNSASAMLVAIKKLNPESAQGFQEWKSEINFLGKISHPNLVKLLGYCWENEELLLVYEFMPKGSLENHLFRRNSNIEPLSWNTRLKIAIGAARGLAVLHTSEMQVIYRDFKASNILLDGDYNAKISDFGLAKLGPVGEDSHVTTRIMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMMTGLRALDPKRPPGQQNLVLWAKPFLSEKRSLKSIMDSKMEGQYSLKAAFQAGQLALKCLQPDPKKRPSMNDVLKALQDIQAIKFKHNKNNKSRESNKQPRNS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0339 425 MobiDBLite consensus disorder prediction 1 62 - -
Aev05g0339 425 CDD STKc_IRAK 120 402 - -
Aev05g0339 425 MobiDBLite consensus disorder prediction 24 47 - -
Aev05g0339 425 PANTHER OS01G0588500 PROTEIN-RELATED 82 413 - -
Aev05g0339 425 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 82 413 - -
Aev05g0339 425 Gene3D Transferase(Phosphotransferase) domain 1 203 424 - -
Aev05g0339 425 ProSitePatterns Protein kinases ATP-binding region signature. 120 142 IPR017441 GO:0005524
Aev05g0339 425 ProSiteProfiles Protein kinase domain profile. 114 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g0339 425 SUPERFAMILY Protein kinase-like (PK-like) 83 399 IPR011009 -
Aev05g0339 425 Pfam Protein tyrosine and serine/threonine kinase 116 399 IPR001245 GO:0004672|GO:0006468
Aev05g0339 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Aev05g0339 425 Gene3D Phosphorylase Kinase; domain 1 100 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0339 Aev-Chr5 2437765 2440639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0339 102 399 Glycoside Hydrolase AT3G07070 50.166 4.85e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aev05g0339 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0339 - - gmx:100794193 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0339 05 2437765 2440639 Aev05g0339 05 2437765 2440639 ECH
Aev05g0339 05 2437765 2440639 Aev01g0119 01 967486 971987 PCT