Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0338 ATGGATTCCTTGCTGACCAACCTCTTGCTCTTCAACAACACCATCCAAAAAGAGTTGGTAAGGAGTGTGCATGTGTATCGAGAATTGTTATTGGATGGGGAAGAAAGGGAAGTTGAGAGGGAGTTTGTGTTTTCTGAGAGTGGCTCCTATGTGGAAATGCAGGCTACCCCAATTCTCACATCACTGAATTTTCGTGTCTCTGAAATCTCTGAAGGGTACCTGAATGGTGTGTGGCTCTGCATCTTTGCGTTTCATTCTGATCACAGCCCTCAATTTTCACACATTCCTTCAATGTTGTTGCTCACTAGAAACCCAAAGCTTGAGACAATCCCAAACTTGCTTAATGATCTCCATGCTATTTACAAGCTGGACTTGAAGGCAAAAGACAAAGATCCACTAGATTCTCCACCGGAAGAATCGCAAGGAAACATCAATGATTGCCAACCTGTGCTCGATCAGGATCTAAATTGTCTTCCTTTTGATGAAGGCACGGCGACTAAGTCGGCGGACAATCAGATAATTGATGAAAGCTCGCCAGGTTTGGTAGCGAAGAAAAAGAGGGCACCGAGCGACCACATAGCAAAACTTTCTCGAGCAGATTTGGTGAAGTACTTTGATATGCCAATTGCAGAAGCATCAATAAAACTTAATGTTGGGCTTACAGTTCTCAAGAGAAAGTGCAGAGAATTCGGTATTTCCCGCTGGCCTCATAGGAAAATCAAATCGCTTGGCAGTCTCATTCATGATCTTCAGAAAGAGGCAAAAAACCAAGAATCAAAGGACAAGGAGGCGGCGATGGCGGTGGCGAAGAGGCAAAAGATGTTGGAGTGCGAAAAGGAGAACATAGAGAAGAAACCCTCCATGGACATACAAAATGAGACCAAGAGGTTCAGGCAGGATGTCTTCAAGAGAAGGCACAGAGCTAGAGCTGTTGAAAAACAGACTTCTTCACTCTCCAACACTTAG 966 0.4431 MDSLLTNLLLFNNTIQKELVRSVHVYRELLLDGEEREVEREFVFSESGSYVEMQATPILTSLNFRVSEISEGYLNGVWLCIFAFHSDHSPQFSHIPSMLLLTRNPKLETIPNLLNDLHAIYKLDLKAKDKDPLDSPPEESQGNINDCQPVLDQDLNCLPFDEGTATKSADNQIIDESSPGLVAKKKRAPSDHIAKLSRADLVKYFDMPIAEASIKLNVGLTVLKRKCREFGISRWPHRKIKSLGSLIHDLQKEAKNQESKDKEAAMAVAKRQKMLECEKENIEKKPSMDIQNETKRFRQDVFKRRHRARAVEKQTSSLSNT* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0338 321 PANTHER PROTEIN RKD4 9 314 IPR044607 GO:0003700
Aev05g0338 321 Coils Coil 240 272 - -
Aev05g0338 321 PANTHER PROTEIN RKD5 9 314 - -
Aev05g0338 321 Pfam RWP-RK domain 196 243 IPR003035 -
Aev05g0338 321 ProSiteProfiles RWP-RK domain profile. 178 263 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0338 Aev-Chr5 2429597 2432783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0338 15 318 AtRKD Transcription Factor Family AT4G35590 48.910 7.81e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev05g0338 RWP-RK 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0338 - - gmx:113001653 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0338 05 2429597 2432783 Aev05g0338 05 2429597 2432783 ECH