Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0318 ATGACGCGCACGCTAAGAATCCTCCAATCCACCACGGAAAACGCCACCGCGGTCGCACCGCCGCCGGAGGCCGTGGCTCTGGAGTCTGATTTCGTGGTCATCCTAGCTGCTCTACTCTGCGCCCTCATATGCGTCGTTGGCCTCGTAGCCGTCGCGAGGTGCGCCTGGCTCCGGCGAGGCTCCGCCGGACCCGGATCCTCGCCGCATCAGGCGCTGGCGAACAAAGGACTTAAGAAGAAGGTGCTCCAGTCGCTGCCGAAGTTCGAGTACGTCGAAGGCGAAAACCCTGGTGGTGGCGGCGGCGCGTGGGTGGTGACGGCGGAGTGTGCGATCTGTTTGTCGGAATTCGCCGCAGGGGACGAGATCCGCGTTCTGCCGCAGTGCGGCCACGGGTTCCACGTGGCGTGCATAGACACGTGGCTGGGGTCGCACTCGTCGTGCCCGTCGTGCCGACAGGTGCTGGCGGTGGCGAGGTGCCAGAAGTGTGGGCGGTTCCCGGCGGCCGGAGGAGGCGCCGCCGCATCAAGAGTGGCGGTCAGTGAAACGGAGCTGAAATCACGGGAAGACGACAATGCGGTTTCGAATAGCAGTAATAATTGCGGCGGTGAGAGTAGCAGTAGAAACATGGAACAAAACGACAAGAATAATTTCTTGCCTTGA 660 0.6227 MTRTLRILQSTTENATAVAPPPEAVALESDFVVILAALLCALICVVGLVAVARCAWLRRGSAGPGSSPHQALANKGLKKKVLQSLPKFEYVEGENPGGGGGAWVVTAECAICLSEFAAGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQVLAVARCQKCGRFPAAGGGAAASRVAVSETELKSREDDNAVSNSSNNCGGESSSRNMEQNDKNNFLP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0318 219 SMART ring_2 109 150 IPR001841 -
Aev05g0318 219 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 196 - -
Aev05g0318 219 SUPERFAMILY RING/U-box 85 156 - -
Aev05g0318 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 156 IPR013083 -
Aev05g0318 219 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Aev05g0318 219 CDD RING-H2_PA-TM-RING 108 151 - -
Aev05g0318 219 MobiDBLite consensus disorder prediction 191 219 - -
Aev05g0318 219 SMART FANCL_C_2 105 159 - -
Aev05g0318 219 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 196 - -
Aev05g0318 219 MobiDBLite consensus disorder prediction 183 219 - -
Aev05g0318 219 Pfam Ring finger domain 108 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0318 Aev-Chr5 2311469 2312128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0318 1 189 C3H Transcription Factor Family AT1G76410 55.155 7.99e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0318 - - adu:107487390 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0318 05 2311469 2312128 Aev01g0101 01 850296 850937 PCT