Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0307 ATGAACGACCTCATGACCAAGTCATTCACCAGCTATGTGGATCTGAAGAAAGCCGCCATGAAAGACGATGAAGCGGACTTGGAAGCAGGGCATCCCCCACCGGGCGTAGAGCTGATGAACTCTTCCTCTTCTTCCACCACCATCCACATGGACAAGGACATGGGTCTCTTCCTCGAAGAGGCCGAGAAGGTCAAAACCGAGATCGGCAACCTCCGCGACATTCTTGGGCGGCTCCAACAAGCCAACGAAGAGAGCAAGTCCCTGCACAAGCCCGACGCCCTCAAATCCCTCAGGAACAGGACCAATGCCGACATTCTCACTCTGCTCAAGAAAGCCAGGGCGATCAGGACCCAGCTGGAGGACATGGACCGCGCCAACGCCGCCAACCGGAGGCTCTCCGCCCTCAAAGACGGCACGCCGGCGATCTACCGGACCAGGATTGCGGTGACCAATGGGCTGCGGAAGAAGCTGAAGGAGCTGATGATGGAGTTCCAGGGGCTGAGGCAGAGGATGATGACGGAGTACAAGGAGACGGTGGGGAGGAGGTACTTCACGGTGACAGGGGAGAACCCGGAGGAGGAGGTGATCGAGAGGATCATAGCGAACGGGGAGGAGGAGGAGTTCCTGGGGAAGGCAATAGCGGAGCACGGGAGGGGGAAGGTGCTGGAAACGGTGGTGGAGATACAGGACAGACACGACGCGGCGAAGGAGGTGGAGAAGAGCTTGCTGGAGCTGCACCAGGTGTTCCTGGACATGGCGGTGATGGTGGAGGCGCAGGGCGAGAAGATGGATGACATCGAGCACCACGTCCTCCATGCCTCCCACTACGTCAAGGACGCCGCCAAGGATCTCCAAACTGCCAAGAAGTACCAGAGCGGCAGCCGGAAGTGGGTGTGCTTTGGAATCATTCTTCTCCTCATTCTCATTCTTGTTATTGCTATCCCCATTGCTACCAGTTTAAGCTCCTCTTGA 972 0.5772 MNDLMTKSFTSYVDLKKAAMKDDEADLEAGHPPPGVELMNSSSSSTTIHMDKDMGLFLEEAEKVKTEIGNLRDILGRLQQANEESKSLHKPDALKSLRNRTNADILTLLKKARAIRTQLEDMDRANAANRRLSALKDGTPAIYRTRIAVTNGLRKKLKELMMEFQGLRQRMMTEYKETVGRRYFTVTGENPEEEVIERIIANGEEEEFLGKAIAEHGRGKVLETVVEIQDRHDAAKEVEKSLLELHQVFLDMAVMVEAQGEKMDDIEHHVLHASHYVKDAAKDLQTAKKYQSGSRKWVCFGIILLLILILVIAIPIATSLSSS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0307 323 MobiDBLite consensus disorder prediction 23 46 - -
Aev05g0307 323 Coils Coil 150 170 - -
Aev05g0307 323 SMART tSNARE_6 220 287 IPR000727 -
Aev05g0307 323 Gene3D - 221 320 - -
Aev05g0307 323 Pfam SNARE domain 262 312 IPR000727 -
Aev05g0307 323 CDD SynN 54 212 IPR006011 GO:0016020
Aev05g0307 323 ProSitePatterns Syntaxin / epimorphin family signature. 231 271 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aev05g0307 323 PANTHER SYNTAXIN-RELATED PROTEIN KNOLLE 5 316 - -
Aev05g0307 323 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 225 287 IPR000727 -
Aev05g0307 323 CDD SNARE_syntaxin1-like 224 286 - -
Aev05g0307 323 Pfam Syntaxin 57 260 IPR006011 GO:0016020
Aev05g0307 323 Gene3D - 54 182 - -
Aev05g0307 323 PANTHER SYNTAXIN 5 316 IPR045242 -
Aev05g0307 323 SMART SynN_4 49 176 IPR006011 GO:0016020
Aev05g0307 323 SUPERFAMILY t-snare proteins 52 280 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0307 Aev-Chr5 2234363 2235334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0307 1 323 SNARE and Associated Proteins AT1G08560 63.272 1.96e-131 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0307 K08486 - gmx:100816016 498.819