Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0261 ATGAAGAACATCAACGACGATGGTTCCGCACAACACCAAGATCTTGACCCTCACAGCGACCACAGCTCCGATTACCTCGCCCATTCTAACCCCAACCCTCAGCCCCGCCGTCCCCGCGGTTTTGCCGCCGCAGCTTCGGCGGCAAATTCCGCCGGGAAGGGGAAGAAGGAGAGGGAGAAGGAGAAGGAGCGCACCAAGCTCCGTGAGCGGCACCGCCGCGCCATTACTAGCCGCATGCTCGCCGGACTCCGCCAGTACGGCAACTTCCCCCTGCCGGCGCGTGCCGATATGAACGACGTACTTGCTGCATTGGCGCGTGAGGCGGGCTGGGTCGTTGAAGCTGACGGCACCACATACCGTCAGTGTCCCCCTCCTTCACATATGGGATCTTTTGCAGCTAGGTCAGTTGAAAGTCAACTCTCTGCTGGTTCTTTGAGACCTTGTTCTGTTAAAGAAACACTGGAGAATCCACCATCTGTGCTTAGGATTGATGAATGCTTGTCGCCTGCGTCCATTGATTCTGTTGTTATTGCAGAAAGGGACTCAAAGAATGAGAAATACACAAGTGCAAGTCCTGTTAATCCGGTTGACTGCTTAGAGGCTGATCAGCTTATGCATGATATTCATTCTGGGATCCATGAGAATGACTTCACTGGCACGCCATATGTTCCTGTTTACTTTAAGCTTCCTGCGGGCATTATCAACAAATTTTGCCAGTTGATTGATCCTGATGGAATTAGGCAGGAGCTAATCCATATGAAGTCTTTAAACATAGATGGGATCATTGTGGACTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCCCAGAAATATGTGTGGTCTGGCTATAGGGAGCTTTTCAACATTATTAGAGAATTCAAGTTGAAGTTACAGGTTGTCATGGCATTTCATGAATGTGGAGGGAATGATTCTAGTGATGCACTGATTGCCCTCCCACAATGGGTTTTGGACATTGGAAAGGACAATCAGGATATATTCTTCACTGATCGTGAAGGACGGAGGAATACTGAATGCCTTTCCTGGGGAATCGATAAAGAGCGAGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGTCTGATTTCTGCTGTTGAAATTGGACTTGGAGCATCTGGGGAACTGAAATACCCTTCTTTTTCAGAAAGAATGGGATGGAGGTATCCTGGGATTGGCGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTACGCAGAGCAGCCAAATTACGTGGCCACACCTTCTGGGCTAGAGGACCTGATAATGCTGGACACTACAACTCTATGCCACATGAAACTGGGTTCTTTTGTGAGCGAGGTGATTATGACAACTATTACGGGCGCTTCTTCTTACATTGGTACTCCCAGACGTTAATAGACCATGCAGATAATGTTCTGTCCCTTGCAAATCTTGCTTTTGAGGAAACAAAACTAATTGTCAAGGTTCCTGCTGTATACTGGTGGTATAAGACTCCCAGTCATGCAGCAGAGTTGACAGCAGGATATCACAATCCCACAAATCAGGATGGATATTCTCCTGTTTTTGAGGTTTTGAGAAAACATTCTGCCACCATGAAATTTGTCTGCCTGGGGTTTCATCTTTCCAACCAGGAAGCTAACGAATCATTGATCGATCCAGAGGGGTTGAGTTGGCAGGTACTAAACTCTGCTTGGGATCGAGGTTTGATTGCTGCTGGAGAGAATGCGCTCCTTTGCTATGACAGAGAAGGCTACAAGAGGTTGGTTGAGATGGCAAAGCCCAGAAATGATCCAGATCACCGGCATTTGTCATTCTTTGTTTATCAACAGCCATCTTTGCTTCAGGGAAATGTTTGCTTGTCAGAATTGGACTTCTTCGTGAAATGCATGCATGGTGAGATGGCAGGAGATCTGTAA 1968 0.4726 MKNINDDGSAQHQDLDPHSDHSSDYLAHSNPNPQPRRPRGFAAAASAANSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCPPPSHMGSFAARSVESQLSAGSLRPCSVKETLENPPSVLRIDECLSPASIDSVVIAERDSKNEKYTSASPVNPVDCLEADQLMHDIHSGIHENDFTGTPYVPVYFKLPAGIINKFCQLIDPDGIRQELIHMKSLNIDGIIVDCWWGIVEGWSPQKYVWSGYRELFNIIREFKLKLQVVMAFHECGGNDSSDALIALPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRRAAKLRGHTFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLANLAFEETKLIVKVPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEVLRKHSATMKFVCLGFHLSNQEANESLIDPEGLSWQVLNSAWDRGLIAAGENALLCYDREGYKRLVEMAKPRNDPDHRHLSFFVYQQPSLLQGNVCLSELDFFVKCMHGEMAGDL* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0261 655 Pfam Glycosyl hydrolase family 14 243 615 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 Gene3D Glycosidases 213 654 - -
Aev05g0261 655 MobiDBLite consensus disorder prediction 52 69 - -
Aev05g0261 655 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 257 271 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 466 485 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 393 415 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 500 516 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 573 595 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 278 296 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 517 528 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 535 558 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 300 321 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 MobiDBLite consensus disorder prediction 1 69 - -
Aev05g0261 655 PANTHER - 57 654 IPR001554 GO:0000272|GO:0016161
Aev05g0261 655 PANTHER BETA-AMYLASE 8 57 654 - -
Aev05g0261 655 Pfam BES1/BZR1 plant transcription factor, N-terminal 52 198 IPR008540 -
Aev05g0261 655 MobiDBLite consensus disorder prediction 1 23 - -
Aev05g0261 655 SUPERFAMILY (Trans)glycosidases 217 650 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0261 Aev-Chr5 1904969 1909247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0261 10 651 Glycoside Hydrolase AT5G45300 65.825 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Aev05g0261 Glyco_hydro_14 3.8e-86 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0261 K01177 - gmx:100777004 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0261 05 1904969 1909247 Aev05g0261 05 1904969 1909247 ECH