Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0242 ATGTTTGGTGGCGGAGGTGACGATGCCCTAGCGGCTCGCCTCGGCATGGTGGCTCCGCCGCAGATGCTGAACCCGGCGACGTCGTCGGTCCTCTCCGGCGAGATATCGCCGTCGGCGGCAGCGGCGGAGAGGGTCCCGGCGCAGCCGCAGTGGAGCCAGCAGGAGACCAGGGAGTTCATAGCGATACGAGCGGAGCTGGAGAGGGACTTCACTGCGTCGAAGAGGAACAAGACGCTTTGGGAGGTTGTGAGCTCGAAGATGAGGGAGAGAGGATTCAGGAGGAGCCCCGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCGGAGCATAGTAGGCAGTGCCCATTTTTTGAAGAATTGCATGCAGTCTTTACTCAAAGAGCACATAACATGCAACGGATGCTCCTTGAATCTGAGGCTCGTTCAGCTCAGACAAAGAAAGGGGTTAAAAGATCTAGTGGAGATCGGTCCTCAGATGAATTCTCAGAGGATGATGTTGAGGCTGAAGATGACAGTGAGGAGGAGAGACCTTCTAGAAGCAATGGTCGCAAGAGGAAAATTGACAAGGTGGAGAAGTCTTCAAGAGCAAACAATCCATCAAATAATGTCAATAATACGACTAGTAGTATCCAGGAAATGCTCAAGGAATTTTTCCAGCACCAGCTAAAGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCCCAAGAAAGACAGCTGTTCGAGCAAGAATGGCGGCAAACAATGGAGAAACTTGAGAGGGAGAGATTAATGATTGAACAGGCATGGAGGGAGAGGGAAGAACAACGGAGAATGAGAGAGGAGAGCCGGGCAGAGAGGAGGGATGCTTTGTTGACAACCCTTTTGAACAAACTCATTCATGAATCTAACTAA 927 0.5102 MFGGGGDDALAARLGMVAPPQMLNPATSSVLSGEISPSAAAAERVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHSRQCPFFEELHAVFTQRAHNMQRMLLESEARSAQTKKGVKRSSGDRSSDEFSEDDVEAEDDSEEERPSRSNGRKRKIDKVEKSSRANNPSNNVNNTTSSIQEMLKEFFQHQLKMEMQWREMMERRAQERQLFEQEWRQTMEKLERERLMIEQAWREREEQRRMREESRAERRDALLTTLLNKLIHESN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0242 308 PANTHER - 48 306 - -
Aev05g0242 308 SMART sant 47 109 IPR001005 -
Aev05g0242 308 MobiDBLite consensus disorder prediction 149 216 - -
Aev05g0242 308 Gene3D - 51 112 - -
Aev05g0242 308 PANTHER - 48 306 - -
Aev05g0242 308 Pfam Myb/SANT-like DNA-binding domain 49 132 IPR044822 -
Aev05g0242 308 Coils Coil 253 273 - -
Aev05g0242 308 MobiDBLite consensus disorder prediction 28 52 - -
Aev05g0242 308 CDD GT1 49 114 - -
Aev05g0242 308 ProSiteProfiles Myb-like domain profile. 51 107 IPR001005 -
Aev05g0242 308 MobiDBLite consensus disorder prediction 153 169 - -
Aev05g0242 308 MobiDBLite consensus disorder prediction 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0242 Aev-Chr5 1782483 1784195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0242 32 308 Trihelix Transcription Factor Family AT2G38250 43.416 1.56e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev05g0242 Myb_DNA-bind_4 5.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0242 - - gmx:100812635 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0242 05 1782483 1784195 Aev05g0242 05 1782483 1784195 ECH