Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0237 ATGGAAACCAACGAGATACTCGAAGAGCTTCTCAGCATCGAGGTCGAGATTCAAGATGTTCAAGACCAAATAAGAGTGTTAATTGAAAGGCAAGAGAAGTTGTACGAGAGAAAATCTGAGCTGAGTGCTATCTTTGAAGCGTGCAAAGAATCTGGGAACCAACAAGTCAATAATGGGGCTTCAAGTTCTGCTGAGAATTGGTCTGGGGAATTCCAATGGGATTCTCAAGCAGATGATATCAGATTGAACATTTTTGGTATTTCCTCCTACCGTGCAAATCAAAGAGAGATAATTAATGCCATCATGAGTGGAAGAGATGTTCTGGTAATTATGGCTGCAGGTGGTGGCAAGAGCCTCTGCTACCAGCTGCCGGCAGTTCTTCGTGATGGAATTGCACTTGTTGTCAGTCCTTTGCTTTCCTTAATTCAAGATCAGGTAATGGGTTTGACTGCTTTGGGTATTCCAGCTTATATGTTGACTTCAACAACAAGCAAGGAAGATGAGAAGTTCATATACAAGGCCCTGGAGAAGGGTGAGGGGGAACTCAAGATATTGTATGTCACTCCAGAAAAGATATCAAAAAGCAAGAGGTTTATGTCAAAACTTGAAAAATGCCATCATGCTGCTCGTCTCTCTCTAATTTCAATTGATGAAGCACATTGCTGTAGTCAGTGGGGCCATGACTTTCGGCCTGACTACAAGAACCTTGGCATTCTCAAGACTCAGTTCCCTAATGTCCCTATGGTTGCTTTGACCGCAACTGCTACTCAAAGGGTCCAAAATGATCTTGTGGAGATGTTGCATATTCCTAGAAGTGTCAAATTTGTCAGCACAGTCAATAGACCAAACTTATTTTATATGGTGAAGGAAAAATCATCGATTGGAAAGGTGGTTATTGACGAAATTGCAGATTTCATTCAACAATCTTATCCAAATAAGGAATCAGGGATTGTTTATTGCTTCTCTAGGAAGGAATGTGAACAGGTTGCAAAGGAGCTACGTGAGAGAGGAATTTCAGCTGATTTTTATCACGCAGATATGGATGTAAATGTTCGGGAAAAAGTACATATGCGGTGGAGCAGTAACAAGCTTCAGGTCATAGTTGGTACAGTAGCATTTGGTATGGGAATCAATAAACCAGATGTCAGGTTTGTCATCCATCACAGCTTGAGTAAATCAATGGAAACATACTATCAGGAAAGTGGTCGAGCTGGCCGAGATGGACTTCCTTCTGAATGCCTATTATACTTCAGACCTGGTGATGTTCCCCGACAGAGTTCAATGGTCTTCTACGAAAATTCAGGACTGCAGAACCTATATGACATTGTACGATATTGTCAGTCCAAACAACAATGCAGACGAAGTGCCTTTTTCCGGCATTTTGCTGAACCTCTACAAGAGTGCAATGGGATGTGTGACAACTGTGCATTCTCAAGTGAGGTGAAGGAAGTGGATGTCTCTCGCCATGCAAAACTAATGGTTTCATTGTTGCAAGATTTCCGAGCAAATGATCAGAGGACAACAATGTTGCAATTAGTTGATAAAATGAAAGTAAAGCAGAAGGATCTAGGTTCTGACTTGAAAAAAGAGGGAATTGAGCAGCTCATCTTACAGCTTTTGCTGGATCATGTTTTGAAAGAGGAATTTCAGCATACAGCTTATGCCACAAATGCTTACATTGCGTTAGGACCGCTGGCCAAGCATATATTGCAAGGGAAGAAAACTGTGAAACTTGAGATTTACAATGAACAGAGAACTAAGGCTGGTGTAAAATCTGCAAAACGCAGCCTTGGGACGACTGGTTTAGAGCTAAAGCTTGATGAACTGAGGAAAGAGTTGTCTTCCAGTCATGGAGGAATTCTCCCACACTCTGTCTTGTCCACTCAACAAATCAGCTTATTAAGCTCTCAAAAACCAAACTCACTAGAACAGCTGGAGAAGGTAATTGGAAAATTGAAGACTGAAAAGTATGGAGCTAGAATTCTTGAGCAAATCGAAAAATATTCTGATTTCAAGCCATCTGATGAAGAACAAGGGACTGATGCTAGACCTGCAAAGAGGTCAAGGGCCAAGAAGAACCTTGTTGTTATTGAGAGTAGTGAAGATGAGCCATGA 2115 0.4147 METNEILEELLSIEVEIQDVQDQIRVLIERQEKLYERKSELSAIFEACKESGNQQVNNGASSSAENWSGEFQWDSQADDIRLNIFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMSKLEKCHHAARLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPMVALTATATQRVQNDLVEMLHIPRSVKFVSTVNRPNLFYMVKEKSSIGKVVIDEIADFIQQSYPNKESGIVYCFSRKECEQVAKELRERGISADFYHADMDVNVREKVHMRWSSNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKQQCRRSAFFRHFAEPLQECNGMCDNCAFSSEVKEVDVSRHAKLMVSLLQDFRANDQRTTMLQLVDKMKVKQKDLGSDLKKEGIEQLILQLLLDHVLKEEFQHTAYATNAYIALGPLAKHILQGKKTVKLEIYNEQRTKAGVKSAKRSLGTTGLELKLDELRKELSSSHGGILPHSVLSTQQISLLSSQKPNSLEQLEKVIGKLKTEKYGARILEQIEKYSDFKPSDEEQGTDARPAKRSRAKKNLVVIESSEDEP* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0237 704 CDD SF2_C_RecQ 281 417 - -
Aev05g0237 704 Pfam Helicase conserved C-terminal domain 310 407 IPR001650 -
Aev05g0237 704 MobiDBLite consensus disorder prediction 668 704 - -
Aev05g0237 704 Gene3D - 281 477 IPR027417 -
Aev05g0237 704 PANTHER ATP-DEPENDENT DNA HELICASE Q1 7 680 - -
Aev05g0237 704 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 298 447 IPR001650 -
Aev05g0237 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 424 IPR027417 -
Aev05g0237 704 Pfam RecQ zinc-binding 420 476 IPR032284 -
Aev05g0237 704 SMART helicmild6 327 408 IPR001650 -
Aev05g0237 704 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 98 273 IPR014001 -
Aev05g0237 704 Pfam HRDC domain 605 664 IPR002121 GO:0003676
Aev05g0237 704 Gene3D - 46 280 IPR027417 -
Aev05g0237 704 Pfam RQC domain 482 586 IPR018982 GO:0006260|GO:0006281|GO:0043138
Aev05g0237 704 Gene3D - 481 582 IPR036388 -
Aev05g0237 704 Gene3D HRDC domain 600 670 IPR044876 -
Aev05g0237 704 PANTHER DNA HELICASE RECQ FAMILY MEMBER 7 680 - -
Aev05g0237 704 ProSiteProfiles HRDC domain profile. 596 675 IPR002121 GO:0003676
Aev05g0237 704 Coils Coil 10 37 - -
Aev05g0237 704 CDD DEXHc_RecQ1 73 280 - -
Aev05g0237 704 SMART ultradead3 86 289 IPR014001 -
Aev05g0237 704 SUPERFAMILY HRDC-like 605 670 IPR010997 GO:0000166|GO:0044237
Aev05g0237 704 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 83 505 IPR004589 GO:0004386|GO:0006310
Aev05g0237 704 Pfam DEAD/DEAH box helicase 92 260 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0237 Aev-Chr5 1760093 1767458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0237 85 422 Eukaryotic Initiation Factors Gene Family AT3G19760 20.670 3.92e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0237 K10899 - gmx:100817635 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0237 05 1760093 1767458 Aev05g0237 05 1760093 1767458 ECH