Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev05g0237 | ATGGAAACCAACGAGATACTCGAAGAGCTTCTCAGCATCGAGGTCGAGATTCAAGATGTTCAAGACCAAATAAGAGTGTTAATTGAAAGGCAAGAGAAGTTGTACGAGAGAAAATCTGAGCTGAGTGCTATCTTTGAAGCGTGCAAAGAATCTGGGAACCAACAAGTCAATAATGGGGCTTCAAGTTCTGCTGAGAATTGGTCTGGGGAATTCCAATGGGATTCTCAAGCAGATGATATCAGATTGAACATTTTTGGTATTTCCTCCTACCGTGCAAATCAAAGAGAGATAATTAATGCCATCATGAGTGGAAGAGATGTTCTGGTAATTATGGCTGCAGGTGGTGGCAAGAGCCTCTGCTACCAGCTGCCGGCAGTTCTTCGTGATGGAATTGCACTTGTTGTCAGTCCTTTGCTTTCCTTAATTCAAGATCAGGTAATGGGTTTGACTGCTTTGGGTATTCCAGCTTATATGTTGACTTCAACAACAAGCAAGGAAGATGAGAAGTTCATATACAAGGCCCTGGAGAAGGGTGAGGGGGAACTCAAGATATTGTATGTCACTCCAGAAAAGATATCAAAAAGCAAGAGGTTTATGTCAAAACTTGAAAAATGCCATCATGCTGCTCGTCTCTCTCTAATTTCAATTGATGAAGCACATTGCTGTAGTCAGTGGGGCCATGACTTTCGGCCTGACTACAAGAACCTTGGCATTCTCAAGACTCAGTTCCCTAATGTCCCTATGGTTGCTTTGACCGCAACTGCTACTCAAAGGGTCCAAAATGATCTTGTGGAGATGTTGCATATTCCTAGAAGTGTCAAATTTGTCAGCACAGTCAATAGACCAAACTTATTTTATATGGTGAAGGAAAAATCATCGATTGGAAAGGTGGTTATTGACGAAATTGCAGATTTCATTCAACAATCTTATCCAAATAAGGAATCAGGGATTGTTTATTGCTTCTCTAGGAAGGAATGTGAACAGGTTGCAAAGGAGCTACGTGAGAGAGGAATTTCAGCTGATTTTTATCACGCAGATATGGATGTAAATGTTCGGGAAAAAGTACATATGCGGTGGAGCAGTAACAAGCTTCAGGTCATAGTTGGTACAGTAGCATTTGGTATGGGAATCAATAAACCAGATGTCAGGTTTGTCATCCATCACAGCTTGAGTAAATCAATGGAAACATACTATCAGGAAAGTGGTCGAGCTGGCCGAGATGGACTTCCTTCTGAATGCCTATTATACTTCAGACCTGGTGATGTTCCCCGACAGAGTTCAATGGTCTTCTACGAAAATTCAGGACTGCAGAACCTATATGACATTGTACGATATTGTCAGTCCAAACAACAATGCAGACGAAGTGCCTTTTTCCGGCATTTTGCTGAACCTCTACAAGAGTGCAATGGGATGTGTGACAACTGTGCATTCTCAAGTGAGGTGAAGGAAGTGGATGTCTCTCGCCATGCAAAACTAATGGTTTCATTGTTGCAAGATTTCCGAGCAAATGATCAGAGGACAACAATGTTGCAATTAGTTGATAAAATGAAAGTAAAGCAGAAGGATCTAGGTTCTGACTTGAAAAAAGAGGGAATTGAGCAGCTCATCTTACAGCTTTTGCTGGATCATGTTTTGAAAGAGGAATTTCAGCATACAGCTTATGCCACAAATGCTTACATTGCGTTAGGACCGCTGGCCAAGCATATATTGCAAGGGAAGAAAACTGTGAAACTTGAGATTTACAATGAACAGAGAACTAAGGCTGGTGTAAAATCTGCAAAACGCAGCCTTGGGACGACTGGTTTAGAGCTAAAGCTTGATGAACTGAGGAAAGAGTTGTCTTCCAGTCATGGAGGAATTCTCCCACACTCTGTCTTGTCCACTCAACAAATCAGCTTATTAAGCTCTCAAAAACCAAACTCACTAGAACAGCTGGAGAAGGTAATTGGAAAATTGAAGACTGAAAAGTATGGAGCTAGAATTCTTGAGCAAATCGAAAAATATTCTGATTTCAAGCCATCTGATGAAGAACAAGGGACTGATGCTAGACCTGCAAAGAGGTCAAGGGCCAAGAAGAACCTTGTTGTTATTGAGAGTAGTGAAGATGAGCCATGA | 2115 | 0.4147 | METNEILEELLSIEVEIQDVQDQIRVLIERQEKLYERKSELSAIFEACKESGNQQVNNGASSSAENWSGEFQWDSQADDIRLNIFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMSKLEKCHHAARLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPMVALTATATQRVQNDLVEMLHIPRSVKFVSTVNRPNLFYMVKEKSSIGKVVIDEIADFIQQSYPNKESGIVYCFSRKECEQVAKELRERGISADFYHADMDVNVREKVHMRWSSNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKQQCRRSAFFRHFAEPLQECNGMCDNCAFSSEVKEVDVSRHAKLMVSLLQDFRANDQRTTMLQLVDKMKVKQKDLGSDLKKEGIEQLILQLLLDHVLKEEFQHTAYATNAYIALGPLAKHILQGKKTVKLEIYNEQRTKAGVKSAKRSLGTTGLELKLDELRKELSSSHGGILPHSVLSTQQISLLSSQKPNSLEQLEKVIGKLKTEKYGARILEQIEKYSDFKPSDEEQGTDARPAKRSRAKKNLVVIESSEDEP* | 705 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev05g0237 | 704 | CDD | SF2_C_RecQ | 281 | 417 | - | - | |
Aev05g0237 | 704 | Pfam | Helicase conserved C-terminal domain | 310 | 407 | IPR001650 | - | |
Aev05g0237 | 704 | MobiDBLite | consensus disorder prediction | 668 | 704 | - | - | |
Aev05g0237 | 704 | Gene3D | - | 281 | 477 | IPR027417 | - | |
Aev05g0237 | 704 | PANTHER | ATP-DEPENDENT DNA HELICASE Q1 | 7 | 680 | - | - | |
Aev05g0237 | 704 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 298 | 447 | IPR001650 | - | |
Aev05g0237 | 704 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 129 | 424 | IPR027417 | - | |
Aev05g0237 | 704 | Pfam | RecQ zinc-binding | 420 | 476 | IPR032284 | - | |
Aev05g0237 | 704 | SMART | helicmild6 | 327 | 408 | IPR001650 | - | |
Aev05g0237 | 704 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 98 | 273 | IPR014001 | - | |
Aev05g0237 | 704 | Pfam | HRDC domain | 605 | 664 | IPR002121 | GO:0003676 | |
Aev05g0237 | 704 | Gene3D | - | 46 | 280 | IPR027417 | - | |
Aev05g0237 | 704 | Pfam | RQC domain | 482 | 586 | IPR018982 | GO:0006260|GO:0006281|GO:0043138 | |
Aev05g0237 | 704 | Gene3D | - | 481 | 582 | IPR036388 | - | |
Aev05g0237 | 704 | Gene3D | HRDC domain | 600 | 670 | IPR044876 | - | |
Aev05g0237 | 704 | PANTHER | DNA HELICASE RECQ FAMILY MEMBER | 7 | 680 | - | - | |
Aev05g0237 | 704 | ProSiteProfiles | HRDC domain profile. | 596 | 675 | IPR002121 | GO:0003676 | |
Aev05g0237 | 704 | Coils | Coil | 10 | 37 | - | - | |
Aev05g0237 | 704 | CDD | DEXHc_RecQ1 | 73 | 280 | - | - | |
Aev05g0237 | 704 | SMART | ultradead3 | 86 | 289 | IPR014001 | - | |
Aev05g0237 | 704 | SUPERFAMILY | HRDC-like | 605 | 670 | IPR010997 | GO:0000166|GO:0044237 | |
Aev05g0237 | 704 | TIGRFAM | recQ_fam: ATP-dependent DNA helicase, RecQ family | 83 | 505 | IPR004589 | GO:0004386|GO:0006310 | |
Aev05g0237 | 704 | Pfam | DEAD/DEAH box helicase | 92 | 260 | IPR011545 | GO:0003676|GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev05g0237 | Aev-Chr5 | 1760093 | 1767458 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev05g0237 | 85 | 422 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 20.670 | 3.92e-08 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev05g0237 | K10899 | - | gmx:100817635 | 1179.47 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev05g0237 | 05 | 1760093 | 1767458 | Aev05g0237 | 05 | 1760093 | 1767458 | ECH |