Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0200 ATGGGGAGTAACTACGGCGGCGGTGAGGGCGAGGGTGAGGGGGGTTATGGGGTGGTGATGAGGATGACGAGGGAGCCGAAGCCAAGGCTGAGGTGGACAGCTGATCTTCATGACCGCTTCGTTGATGCAGTCACTAAGCTTGGTGGCCCCGACAAGGCGACTCCCAAATCTGTTCTGAGGATAATGGGCTTAAAAGGGTTGACATTATATCATTTGAAGAGCCACTTACAGAAGTATAGACTTGGACAACAGGCTAGAAAACAAAATGAAGAACATCACAAAGAGAACAATAGATGTTCATATGTAAATTTCAGCAACCACTCTTCAGGACATAACACCAGTTACAGTGGTGATAATGAACGAGGAGAAATTCCAATAGCAGAAGCACTAAGGCATCAGATTGAAGTCCAAAAAAGATTGGAAGAGCAGCTAGAGGTACAAAAGAAATTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCAGTGTTAGAGAAAGCACAGAGGACACTGTCATTGGATGGAGCAAACAGTAGTCTAGAAGAATCAAGAGCTCAATTGACTGAATTCAACTCTGCCTTGTCCAATTTCATGGAAAATGTTAATAAAGATAGCAAAGAAAACATAATAGGCTTGAATGGTTTTTACAATAAGGGCCATGGTTCAGCTTTCCGTTATCAAGAATTAGTAGGGAGAGAAGAGAATTTGGATCAAAAGCCTAAGATTGAAGAGGGTTCAGTACAGTTTGACTTAAATACTAAAGGTAGTAGCTATGACCCTTTATCTGCAAATGGAGCTGAAATGGAAACCAAGATGCTTTCTTACAGACTATAG 837 0.4217 MGSNYGGGEGEGEGGYGVVMRMTREPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRIMGLKGLTLYHLKSHLQKYRLGQQARKQNEEHHKENNRCSYVNFSNHSSGHNTSYSGDNERGEIPIAEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSLDGANSSLEESRAQLTEFNSALSNFMENVNKDSKENIIGLNGFYNKGHGSAFRYQELVGREENLDQKPKIEEGSVQFDLNTKGSSYDPLSANGAEMETKMLSYRL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0200 278 Pfam Myb-like DNA-binding domain 30 80 IPR001005 -
Aev05g0200 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 265 IPR044848 GO:0003700
Aev05g0200 278 SUPERFAMILY Homeodomain-like 26 84 IPR009057 -
Aev05g0200 278 Gene3D - 26 84 - -
Aev05g0200 278 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 27 82 IPR006447 GO:0003677
Aev05g0200 278 Coils Coil 127 157 - -
Aev05g0200 278 Coils Coil 181 201 - -
Aev05g0200 278 Pfam MYB-CC type transfactor, LHEQLE motif 125 171 IPR025756 -
Aev05g0200 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 265 - -
Aev05g0200 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 84 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0200 Aev-Chr5 1526439 1528718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0200 18 197 G2-like Transcription Factor Family AT3G24120 52.432 2.09e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev05g0200 Myb_DNA-binding 6.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0200 - - adu:107487134 442.195