Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0193 ATGGCAGCTTGTACTGTCTATTCCACACAAGCTTTCAACACAAATTGTTCAATCCCAACAGCATCAAAAACACATTTTGGATTCCACCAAAGACAAGTAGTTTTCTACACAACAACCAACAAAAGGAACACCAGCAAGAGGAACATCATCAACACTAGCCCCTATGTGATAACATGCTCTGCAGGTGACTCACAGACAGTGGTGATTGGTCTAGCTGCAGACTCAGGGTGTGGCAAGAGCACCTTCATGAGGAGGCTCACAAGCGTGTTTGGTGGAACAGCAGAGCCTCCAAAAGGTGGCAACCCTGACTCAAACACTCTCATCAGTGACACAACCACTGTGATTTGTTTGGATGATTACCATTCTTTGGACAGAACTGGCAGAAAAGAGAAGGGTGTCACTGCACTTGACCCTAGAGCCAACGATTTTGACCTCATGTATGAACAAGTTAAGGCTCTTAAGGATGGTTTTGCTGTTCAGAAACCAATTTACAACCATGTCACTGGCTTGTTGGATCCACCAGAGCTCATTAAGCCTCCCAAAATCTTGGTCATTGAAGGTTTGCACCCAATGTTTGATTCTCGGGTCAGAGATCTGTTGGACTTCAGCATCTACTTAGACATAAGCAATGAAGTCAAATTCGCATGGAAAATTCAGAGAGACATGGCAGAGCGTGGACACAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGGAAGCCTGACTTTGATGCTTATATTGATCCTCAAAAGCAATATGCAGATGCTGTGATAGAAGTGTTGCCAACACAACTGATCCCTGATGACAATGAGGGGAAGATCTTGAGAGTGAGGTTGATACAGAAAGAAGGGGTTAAGTATTTCAGCCCTGTTTACTTGTTTGATGAGGGCTCCACCATTTCATGGATACCCTGTGGAAGGAAGCTTACATGCTCTTACCCTGGCATCAAATTCTTCTATGGACCTGACACCTACTTTGGCAATGAGGTGTCAGTGGTGGAAATGGATGGTCAATTTGACAGACTAGATGAGCTAATATACGTAGAGAGCCATCTGAGCAACCTCTCAACAAAGTTCTATGGAGAGGTGACTCAGCAGATGCTGAAGCATGCTGACTTCCCTGGCAGCAACAATGGCACTGGTCTCTTCCAAACCATTGTTGGTCTCAAAATCAGAGACTTGTTTGAGCAGATTGTAGCCACCAAGGCTGAGGCTACCGTAGGAGCAGCTAAGGCTTAA 1239 0.4496 MAACTVYSTQAFNTNCSIPTASKTHFGFHQRQVVFYTTTNKRNTSKRNIINTSPYVITCSAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKDGFAVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPDTYFGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVATKAEATVGAAKA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0193 412 PANTHER URIDINE KINASE 7 412 - -
Aev05g0193 412 Gene3D - 63 297 IPR027417 -
Aev05g0193 412 ProSitePatterns Phosphoribulokinase signature. 217 230 IPR006082 GO:0005524|GO:0005975|GO:0008974
Aev05g0193 412 PANTHER PHOSPHORIBULOKINASE 7 412 - -
Aev05g0193 412 CDD PRK 68 357 - -
Aev05g0193 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 337 IPR027417 -
Aev05g0193 412 Pfam Phosphoribulokinase / Uridine kinase family 68 266 IPR006083 GO:0005524|GO:0016301
Aev05g0193 412 PRINTS Phosphoribulokinase family signature 235 258 IPR006082 GO:0005524|GO:0005975|GO:0008974
Aev05g0193 412 PRINTS Phosphoribulokinase family signature 217 234 IPR006082 GO:0005524|GO:0005975|GO:0008974
Aev05g0193 412 PRINTS Phosphoribulokinase family signature 182 200 IPR006082 GO:0005524|GO:0005975|GO:0008974
Aev05g0193 412 PRINTS Phosphoribulokinase family signature 73 90 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0193 Aev-Chr5 1484805 1487185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0193 120 294 PRT Gene Family AT3G27440 26.966 3.97e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0193 K00855 - gmx:100807126 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0193 05 1484805 1487185 Aev05g0193 05 1484805 1487185 ECH