Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0191 ATGGGTCGCAAACACGACGCCGTTTTAGCAACCGAACCAGTCGCCGAAGCTAACCCTGAACTCAAATCCGAGAAGAAGAAGAAAAAGAAGAACAAAAACAAAGACATCCAAAACGGAACCACCAGTCCCAAAAGAAAGTTCGATGAACTCAACCCCCAAAATGACGACCACGAATCGAACAAGGATAAGAAGAAGAAAAAGAAGCACAAGCACGATTCCAAAGAGAATGTAAACGGAACAAAACCCGAATCCGAATCCGTCGACGGAGGCAGCGGAGGCGACGATGAAACGGTCGCCGATGGGCACGTGGTGGTCACCGGGAAGAACGCCGCCGACGCGAAGTACGCGCCTGTGAAGAGCTTCGCCGGTTCGGGGCTGCCGGAGAATGTTCTGGAGTGCTGCAAGGGTTTCGAGAAGCCTTCTCCGATTCAGTCGCGAGCGTGGCCTTTCTTGTTGGACGGTCGTGATTTGATTGGAATCGCAGCAACTGGATCTGGGAAGACGTTGGCGTTCGGGATTCCGGCGGTTTTGCACGTTCTGGGGAAGCGGAAGAACAAAGCGCCGAAGGGACGGAGTCCTCTTTGCCTCGTGCTTTCTCCCACCAGGGAGCTTGCTCAACAAATATCAGATGTTATGTGTGATGCTGGTAGGTCATGTGGTGTGGATTCAGTTTGTTTGTATGGTGGAACATCTAAAGGACCACAAATTGCTTCACTGAAGTCTGGCATTGATGTTGTCATTGGAACTCCTGGACGTATACAGGATCTGATCGAAATGGGTGTCCTCAGCCTCAAAGAAGTATCTTTTGTGGTGCTTGATGAAGCAGATAGGATGCTTGACATGGGTTTTGAACAAGTAGTCCGCTCTATACTTGGTCAGACATGTACTGTTCGTCAAATGGTGATGTTCAGTGCCACATGGCCCTTACCAGTTCACTACTTAGCACAGGAATTTATGGATCCCAACCCTGTAAAAGTTGTTGTAGGTTCAGAGGATTTAGCTGCCAATCATGATGTCATGCAGATAGTTGAGGTCTTGGATGATCGTGCACGTGACAAGCGACTGGTTGCTTTACTGGAAAAGTACCACAAATCTAAAAGGAACCGAGTATTGGTTTTTGTTTTGTACAAAGCGGAAACTGCAAGAGTTGAAAGGATGCTTCAGGAAGGAGGTTGGAAGGTTGTGTCAATTCATGGCGACAAAGCACAACATGATCGTACAAAGGCACTGTCGTTATTCAAGCAGGGGAGCTGTCCTTTAATGATTGCTACTGATGTGGCTGCTCGAGGATTGGATATTCCAGATGTTGAAGTGGTGATCAACTACAGTTTCCCCCTGACTACAGAAGACTATGTTCATAGAATTGGGCGTACTGGACGTGCTGGGAAGAAAGGGGTTGCCCATACATTCTTCACACAGCAGAATAAGGGTCTCGCTGGCGAGCTCGTTAATGTTTTAAGAGAAGCAGGGCAAATTGTGCCAGATGCTCTTTTGAAATTTGGCACACATGTAAAGAAAAAGGAGTCCAAGCTTTATGGGGCCCACTTCAAGGAAATTCCTGTTGATGCTCCAAAGTCTCAAAAAATAACATTTGACAACTCTGACGATGAAGACTAA 1617 0.4737 MGRKHDAVLATEPVAEANPELKSEKKKKKKNKNKDIQNGTTSPKRKFDELNPQNDDHESNKDKKKKKKHKHDSKENVNGTKPESESVDGGSGGDDETVADGHVVVTGKNAADAKYAPVKSFAGSGLPENVLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAVLHVLGKRKNKAPKGRSPLCLVLSPTRELAQQISDVMCDAGRSCGVDSVCLYGGTSKGPQIASLKSGIDVVIGTPGRIQDLIEMGVLSLKEVSFVVLDEADRMLDMGFEQVVRSILGQTCTVRQMVMFSATWPLPVHYLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRARDKRLVALLEKYHKSKRNRVLVFVLYKAETARVERMLQEGGWKVVSIHGDKAQHDRTKALSLFKQGSCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQQNKGLAGELVNVLREAGQIVPDALLKFGTHVKKKESKLYGAHFKEIPVDAPKSQKITFDNSDDED* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0191 538 MobiDBLite consensus disorder prediction 1 99 - -
Aev05g0191 538 CDD SF2_C_DEAD 339 471 - -
Aev05g0191 538 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 148 325 IPR014001 -
Aev05g0191 538 SMART helicmild6 381 462 IPR001650 -
Aev05g0191 538 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 271 279 IPR000629 -
Aev05g0191 538 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 354 501 IPR001650 -
Aev05g0191 538 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 10 524 - -
Aev05g0191 538 Pfam DEAD/DEAH box helicase 142 308 IPR011545 GO:0003676|GO:0005524
Aev05g0191 538 PANTHER BNAA08G07020D PROTEIN 10 524 - -
Aev05g0191 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 475 IPR027417 -
Aev05g0191 538 MobiDBLite consensus disorder prediction 48 62 - -
Aev05g0191 538 SMART ultradead3 136 342 IPR014001 -
Aev05g0191 538 CDD DEADc 135 326 - -
Aev05g0191 538 Gene3D - 329 504 IPR027417 -
Aev05g0191 538 Gene3D - 91 328 IPR027417 -
Aev05g0191 538 Pfam Helicase conserved C-terminal domain 353 462 IPR001650 -
Aev05g0191 538 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 119 145 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0191 Aev-Chr5 1471235 1474833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0191 117 470 Eukaryotic Initiation Factors Gene Family AT3G19760 34.270 2.26e-56 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0191 K14811 - gmx:100305353 874.004