Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0179 ATGGGTTACGAAGACGATCCGTACCGTGACGAGGACGGAGAACCCTTGATGGACTACGACGACGTTCAATCCGATCGCGAGCCCTCCCCGGGCCCCCAACAACACCTCGACGACTACGACGACGATGAAGACGCTGGCGATTATCGCCGCCGCGACCGCTCGCAGACCCCGGTCTACGACAACGATCCGTCAAGGTCCTCGAAGCCGAGGAAGCGGCTCATCAAGAAGAGCGACGGCGGGAAGCAGTCGGTGGCGCCGGAGCTCGAGGACGAGGTGGCTGAGTACGAGGAGGATGACGGCATTCCGTCGAGGTTCGGAAGGGAGGGGTCGGATGATGGGGAGGGGAGGAAGAGGAAGAAGATGAAGGAGGCTGGGAGTGGGAAGAAGGAGAAGAGGCTCAAGGGGGATAAGAGGTTTGGGAGTGGAAGTAGCGGTGGGAAGAGTGGGTCCAAATTTGGGGGTTCGAAGAAAGGGTTTGGTGGTAAGGGAGGGAAGGATCACGATGGTGAAGTTAAGGAGATGTGGGATACTATTGCTGGAGGTGATTCTGAGGATGATCATGAGGGTGTCAGGAATATGGATGATGACAACTTTATAGATGACACTGGTGTGGAACCTGCATACTATGGCAGCGATGAGCCACGTTCTCCTGGTGATGCTCCCCAGGCAGAGGAAGGTGAGGAGGATGATGAAATAAAGGATCTTTTCAAGATAGGTAAGAAGAAGAAGAAGAATGAGAGAAGTCCCGCAGAAATAGCTTTACTTGTTGAAAATGTCATGGCTGAGCTTGAGGTTACAGCTGAAGAGGATGCTGAACTTAATAGACAGGGGAAGCCTGCTATTAATAAGCTCAAGAAGTTGCCTCTTTTAACAGAAGTACTTTCAAAGAAACAGCTTCAACTAGAGTTTTTAGATCATGGTGTGTTAACTTTATTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGCTTGCCAAATATAAACATACGCTCAGCAATTTTGAACATCCTGAACGATTTTCCCATTGATCTGGAGCAGTATGATAGAAGGGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTTATCATGTTTTTATCAAAGTCTGACGAAGAAATCAATGCAAATAGGAAATTAGCCAAGGATCTGGTTGATAAATGGAGCCGACCTATATTTAATAAGAGTACGCGATTCGAAGACATGAGAAATGTTGAGGATGAAAGGATTCCTTACAGGAGGCCATCTGTTAAAAAACCAGCCAATAAAGCCACAGGAATGGAATCTAGAGATGGTGATCTTGATTTGGAATTTTCACAGCCTAGATCTGGACAATCCTCTTCTAGGCAACATGCATCAAGGCCAGAAGCAACACCCTTGGATTTTGTGATCCGTCCCCAGTCTAAAATTGATCCAGAAGAAGTAAGAGCCCGGGCAAAACAAGCTGCACAAGATCAGCAGCGAATGAAGATGAATAAGAAGTTGCAGCAGTTGAGGGCCCCAAAGAAGAGGCAGCTTCAGGCTACAAAACTGAGTGTGGAAGGCCGTGGCATGGTCAAATATTTGTAG 1563 0.4811 MGYEDDPYRDEDGEPLMDYDDVQSDREPSPGPQQHLDDYDDDEDAGDYRRRDRSQTPVYDNDPSRSSKPRKRLIKKSDGGKQSVAPELEDEVAEYEEDDGIPSRFGREGSDDGEGRKRKKMKEAGSGKKEKRLKGDKRFGSGSSGGKSGSKFGGSKKGFGGKGGKDHDGEVKEMWDTIAGGDSEDDHEGVRNMDDDNFIDDTGVEPAYYGSDEPRSPGDAPQAEEGEEDDEIKDLFKIGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRSAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINANRKLAKDLVDKWSRPIFNKSTRFEDMRNVEDERIPYRRPSVKKPANKATGMESRDGDLDLEFSQPRSGQSSSRQHASRPEATPLDFVIRPQSKIDPEEVRARAKQAAQDQQRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMVKYL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0179 520 MobiDBLite consensus disorder prediction 160 198 - -
Aev05g0179 520 Pfam TFIIS helical bundle-like domain 336 390 IPR017923 -
Aev05g0179 520 PANTHER PROTEIN IWS1 HOMOLOG 1 1 520 - -
Aev05g0179 520 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 305 393 IPR035441 -
Aev05g0179 520 MobiDBLite consensus disorder prediction 44 68 - -
Aev05g0179 520 MobiDBLite consensus disorder prediction 1 230 - -
Aev05g0179 520 MobiDBLite consensus disorder prediction 1 18 - -
Aev05g0179 520 MobiDBLite consensus disorder prediction 98 138 - -
Aev05g0179 520 MobiDBLite consensus disorder prediction 465 481 - -
Aev05g0179 520 Coils Coil 256 276 - -
Aev05g0179 520 ProSiteProfiles TFIIS N-terminal domain profile. 310 393 IPR017923 -
Aev05g0179 520 MobiDBLite consensus disorder prediction 409 505 - -
Aev05g0179 520 MobiDBLite consensus disorder prediction 437 452 - -
Aev05g0179 520 PANTHER PROTEIN IWS1 HOMOLOG 1 1 520 IPR044204 GO:0009742|GO:0032784
Aev05g0179 520 MobiDBLite consensus disorder prediction 19 36 - -
Aev05g0179 520 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 249 396 IPR035441 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aev05g0179 Med26 1.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0179 K17498 - gmx:100801805 800.045