LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev05g0178	ATGGGAATTTGCAGCAGTAAAAGTGTGGCAAATGGTAAACCAAAATCCAAAATCACAGCGGACAGCGACACCCTTGTTTTTCATCATCCTCGAAGCAGATCAGATCTTAACTTTGCTTTTTCTCCAGCTTTTGGAGGGTCCCAAGCTTCCCTGAGCGCTGGATTTTCACTTTTCAGAACCCAGAATATTGTTGCCTTTTCAAATTTTGATATAGATTTTGGTGGTAGTGTGTATTGTATAAGGATCTCTGATTTTGTAGAGAAGTTCAATATTGAAGAATGTGGTTTTAGTGTAACGGGCATAACTTTAAGGTGGTTAATTCTGCTTGTCAGTTTTGAAGGAGAATGGTCTCTTTACTGCCTTGTAACCAGTGAGATGGATAAAACCCCAAAAGAGAAGGAGTCAAAGACGCCTCCACCACCTACATCACAGGAACAGTCTTCGACAACCAGCGCCGGAACTATTAATCCTGACTGGTCCAGCTTTCAGGCATATTCTCCTATACCTCCGCATGGGTTCTTGGCGTCAAGTCCCCAAGCCCACCCATATATGTGGGGCGTCCAGCATATTATGCCTCCCTATGGTACTCCACCACATCCCTATGTTGCAATGTATCCCCACGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTCAGTCCTTTTGCCATGCCTTCTCCAAATGGTGTTGCTGAGGCTTCTGGAAATACTCCTGGCAGCATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAACTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAAAATAATGAACTTGGTAAAACACCCGGGACATCTGCTAATGGAGTTCATTCAAAGAGTGGTGAGAGTGCAAGTGAAGGTACCAGTGAAGGAAGTGATGCCAATTCTCAGAATGACTCTCAATTGAAATCAGGAGGCAGGCAGGATTCTTTTGAAGACGAACCATCTCAAAATGGCAGTTCAGCACATGCTTCTCAAAATGGGGGACTTAGTACACCTCATACGGTGGTTAATCAAACTATGTCCATCATACCTATCACTGCTGGTGGTGCTCCTGGTGCAGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGGACACCAGCATCTAACATTCCTGCACTGCGTGGAAAGGTTCCATCTACTGCAGTTGCTGGAGGAATGGTTACTGCTGGATCACGGGATAGTGTTCAGTCACAACTTTGGATACAGGACGAGAGAGAGCTTAAAAGACAAAGGCGCAAGCAGTCTAACAGGGAATCTGCTCGCAGATCGAGGTTGCGCAAGCAGGCGGAGTGTGATGAGCTAGCTCAGCGTGCTGAGGCATTGAAAGAAGAAAATGCTTCTCTCCGGTCAGAAGTAAGTCGGATGAGGAGTGAATACGAGCAGCTACAATCTGAGAATGCAGCTCTCAAGGAGAGGCTCGGCGAACTGCCCGGGAATGACGAACTCAGGTCTGGAAGGAATGATCAGCCGGCGGATAACGACACTCAACAAAGTGGGCAGGCAGAGGCCGTGCAGGATGGTCATTAG	1590	0.4635	MGICSSKSVANGKPKSKITADSDTLVFHHPRSRSDLNFAFSPAFGGSQASLSAGFSLFRTQNIVAFSNFDIDFGGSVYCIRISDFVEKFNIEECGFSVTGITLRWLILLVSFEGEWSLYCLVTSEMDKTPKEKESKTPPPPTSQEQSSTTSAGTINPDWSSFQAYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSPNGVAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNNELGKTPGTSANGVHSKSGESASEGTSEGSDANSQNDSQLKSGGRQDSFEDEPSQNGSSAHASQNGGLSTPHTVVNQTMSIIPITAGGAPGAVPGPTTNLNIGMDYWGTPASNIPALRGKVPSTAVAGGMVTAGSRDSVQSQLWIQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRMRSEYEQLQSENAALKERLGELPGNDELRSGRNDQPADNDTQQSGQAEAVQDGH*	530

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev05g0178	529	MobiDBLite	consensus disorder prediction	495	509	-	-
Aev05g0178	529	CDD	bZIP_plant_GBF1	430	480	IPR045314	GO:0003700\|GO:0006355
Aev05g0178	529	Pfam	G-box binding protein MFMR	129	217	IPR012900	-
Aev05g0178	529	PANTHER	BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN	123	527	-	-
Aev05g0178	529	MobiDBLite	consensus disorder prediction	510	529	-	-
Aev05g0178	529	MobiDBLite	consensus disorder prediction	425	451	-	-
Aev05g0178	529	Pfam	bZIP transcription factor	425	487	IPR004827	GO:0003700\|GO:0006355
Aev05g0178	529	Gene3D	-	428	482	-	-
Aev05g0178	529	SMART	brlzneu	425	489	IPR004827	GO:0003700\|GO:0006355
Aev05g0178	529	SUPERFAMILY	Leucine zipper domain	428	484	IPR046347	GO:0003700\|GO:0006355

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev05g0178	Aev-Chr5	1388920	1393211	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev05g0178	121	529	bZIP Transcription Factor Family	AT2G35530	62.740	5.21e-168	480

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Aev05g0178		MFMR_assoc	2.4e-60	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev05g0178	K09060		-	gmx:778122	670.618

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