Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0162 ATGGAGCTATTCCCAGCACAACCGGACTTGTCCTTACAAATCAGCCCTCCAAACACAAAACCCACATCAAAAACCTGGAGAAGAACCTCCACAACAGAAGCAGAAGCAGAAGCAGAAGCAGAAGAAGAAGAAGAAGTGGTTGATTTGGGGTTCTGGAAGAGAGCCTTGGACTCAAGAAACTCCCTATCTTCATTACCAATGGCCAAAACCGACAGCAGCCACTTCGGGCTCTCACTCTCAAACCCAACAGCAACAAGGCCCTCATCGGACAGCCCCAACAACCTCATTCACCACCACCACTTCCAAACCACCAATGCTAACAGCCCCTTATTCCAGTCTTTTCAGCATTACTTCCAGCACCATCAGCCACAGCAGCAGCAGCAGAGCCTGCTGAGCCAAGAACTGGGTTTTCTGAGACCAATAAGAGGGATCCCAGTGTACCAGAACCCACCTCCTTTGCCGTTCTCCAATCCCCATCTTCTAGAAGCTTCTCCCACAACACCTTCTTCATCAATCCCAAACACAGTAGGGGCCTCAACCCATTTCCAGTCACAGGCTCTGATGCGGTCGCGGTTCCTCTCGCGATTCCCTGCGAAGCGGAGCATGAGAGCTCCAAGGATGCGCTGGACTACCACACTCCATGCTCGCTTCGTTCACGCCGTTGAGCTATTAGGAGGCCATGAAAGGGCTACACCAAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTTAAGTCTCATTTACAGATGTACCGGACCGTCAAAACTACAGATAGAGCAGCAGCGGCTTCATCAGGGCAATCAGATGTATATGACAATAGATCATCTGGAGATACTTCTGAGGACTTAATGTTTGATATCAACTCCTCTTCTTCAAGGAGGTCTGATTTATTATCCATTAAGCAGCAGGGAAGGTCAACAAGTGTTAATAATAATCAAGATAATATTAATAATAATAAGGAATATCATCATGCGCTTTGGAGCAACTCTTCAAGGGAAGCTTGGTTGCATGGCAAGCCAAAGGCTACTGATTCTGTTGGGAACGTGCCTTCCCTTGAGAGGGAAATGGATCCAAAGTGCCTAAGCTATGAGAGATTATCAGATGGAGGAAGCTCATCCTCAAACCTGTCAGCATCAAGCCCCAACAAGAAACCTAATTTGGATTTGGAATTCACATTGGGACAACCACTTTGA 1209 0.4715 MELFPAQPDLSLQISPPNTKPTSKTWRRTSTTEAEAEAEAEEEEEVVDLGFWKRALDSRNSLSSLPMAKTDSSHFGLSLSNPTATRPSSDSPNNLIHHHHFQTTNANSPLFQSFQHYFQHHQPQQQQQSLLSQELGFLRPIRGIPVYQNPPPLPFSNPHLLEASPTTPSSSIPNTVGASTHFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAAASSGQSDVYDNRSSGDTSEDLMFDINSSSSRRSDLLSIKQQGRSTSVNNNQDNINNNKEYHHALWSNSSREAWLHGKPKATDSVGNVPSLEREMDPKCLSYERLSDGGSSSSNLSASSPNKKPNLDLEFTLGQPL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0162 402 MobiDBLite consensus disorder prediction 11 29 - -
Aev05g0162 402 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 401 - -
Aev05g0162 402 Pfam Myb-like DNA-binding domain 206 257 IPR001005 -
Aev05g0162 402 MobiDBLite consensus disorder prediction 64 92 - -
Aev05g0162 402 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 205 258 IPR006447 GO:0003677
Aev05g0162 402 MobiDBLite consensus disorder prediction 263 322 - -
Aev05g0162 402 MobiDBLite consensus disorder prediction 371 391 - -
Aev05g0162 402 SUPERFAMILY Homeodomain-like 202 258 IPR009057 -
Aev05g0162 402 MobiDBLite consensus disorder prediction 1 43 - -
Aev05g0162 402 MobiDBLite consensus disorder prediction 345 402 - -
Aev05g0162 402 Gene3D - 204 261 - -
Aev05g0162 402 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 401 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0162 Aev-Chr5 1269796 1275267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0162 1 401 G2-like Transcription Factor Family AT4G17695 37.352 1.22e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev05g0162 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0162 - - aprc:113868756 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0162 05 1269796 1275267 Aev05g0162 05 1269796 1275267 ECH