Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0161 ATGGTGGAAGGAAGAGTACGACTATCGAAGGAAGCTAGGCATGGGTTAGAAATTTTGAAGCGTAGAAGGCTAGAGCGTGCAAAGTTGGCAACTGCCACTGACACAAGTGTAGCTAACATGATGAACAGAAGTGGAGGAGATGCTCTAAGAGCTTCTTCTTCATGTGGTGTGAGATTGCATGGTAATGCAGATGCCTTCTCCAAGCGGAAGGTGGATAAGTTTGACACAAGTGATCTAGAATGGACTGATAAAATTCCAGAGTGTCCTGTTTATACTCCAACACGAGATGAATTTGAGGATCCATTGGTTTATTTGCAAAAGATTGCTCCTGAAGCTTCTAAATATGGTATATGCAAGATTGTTTCACCTTTGAGTGCTTCTGTTCCTGCTGGGGTTGTTTTAATGAAGGAGAAAGCAGGATTCAAGTTTACAACTAGAGTGCAGCCTCTTCGCCTTGCTGAATGGGATACTGAGGACAAAGTTACCTTTTTTATGAGTGGAAGAAATTATACATTTCGTGATTTTGAGAAAATGGCGAACAAGGTTTTTGCGCGAAGATATTGCAGCGCTGGATGTCTTCCTGCCACATACTTGGAAAAAGAGTTTTGGCAAGAAATAAGTTGTGGCAAAATGGAAACTGTGGAGTATGCATGTGATGTTGATGGCAGTGCATTTTCATCTTCTCCAACTGATCAGCTTGGTCAGAGCAACTGGAATTTAAAGAAACTTTCGCGGTTGCCTAAATCAACTTTGCGGCTCCTGGAAACATCAATTCCGGGAGTAACGGAACCCATGTTATACATTGGAATGCTGTTTAGTATGTTTGCTTGGCATGTGGAGGATCATTATTTGTACAGCATTAATTATCAACACTGTGGGGCATCAAAGACATGGTATGGCATTCCAGGTCATGCGGCTTTGGACTTTGAAAGGGTGGTTAGAGAACATGTGTATACTAATGATATTTTGTCGAGTGATGGGGAAGATGGAGCCTTTGATGTTCTCCTGGGGAAGACAACACTTTTTCCACCAAATATTTTGTTGGAGCATAAAGTTCCTGTCTACAGGGCTGTTCAAAAGCCGGGGGAGTTTGTAATAACCTTCCCTAGGGCATATCATGCTGGCTTCAGTCATGGTTTCAACTGCGGAGAAGCTGTGAATTTTGCAATTGGTGATTGGTTTCCATTAGGGGCTATTGCTAGCCGCAGATATGCGCTTCTTAATAGGATTCCTTTGTTGCCCCATGAAGAACTTCTATGCAAAGAAGCAATGCTTCTTTATACATCCTTGGAACTTGAAGATCCAGACTTCCCCTCTGCAGACTTGCTATATCATAATTGCATTAGGGCTTCTTTTGTTAATTTGATGCGTTTCCAGCATTGTGCTCGTTGGCTCCTAATGAAATCAAGAGCATGTATAAGTGTCTCTTCTCATTCACATGGTGCGATTCTCTGTAGTGTCTGCAAACGGGACTGTTATGTAGCTTTTGTTGACTGCAACTGTCACTTGCATCCAGTATGCCTACGACATGATATTGAATCTCTTGACTTCACTTGTGGGAGCAAATACACTCTCTTTTTGAGGGAGGATATCATGGACCTGGAAGCTGCAGCCAAGAAGTTTGAGCAGGAAGATGGGATACTGGAGGAGATACTTAAACAAACCCAACGTGACCAAAACATGTATTCATATCCTTTGCTGAACATGTTTCAGAAAGCTGAGGCAAATGGATACACACCTTATTGTGAGCTGAAACTTGATTCTGTTGTTGAATTTTATACAACTCCAGAGCAGACATCAAGTAATCAAGAGTGTGGTACACAAAGTCAACATGTTTTTAGACATTGCTTGGAATATATTAAACCAGAAGTGTCTGAGATTTCCTTTACTTCTGCTGCATCCGCTCTCTGTTCCCTTTCAGAACATCTCGACTCCCCTGCTCTAAAAAATCCTGTGGGGCATGCCAACTTCAAGCTAGGAAGTATTGATTTTGAGGATTTTGGTGAAACAATATCGAAAAGTGCATTTGAATCTTCAACATCCGCTGCTCCTCAGTATCAGGAAAGCTTGTGTAAACCCCAGGGAAATCTTCATAGATTTGACACAAAGCCCATTGTGGATAATGGGAGTGATGATTCCGATTCTGAGATGTTTAGGGTAAAGCGCCCTTCTTCTCTGAAAGCAGAGAGGAGAAATGCGAATGATGCTTCATATTTGAAGCAATCTGAGCAGCAGGGACTCAAACGATTGAAGAAAGTCCTTCCCGAAGCAAGAAGTGTGCAATCAATGGATATCAGCAGAACCAATGAATCAAGTTACAAATACGGTCACCCTGTTAATCATAAACTTGATGGTGAGAGGGACCGATTTTCAAGGGGGAACGGCATTCCCATTTCTGTAAGGTATAAGAAGTTTGGCAATGAGGAGATATGTAGGCAACGAGATCACCACCGGAGAGACAAGGTGCAGCAGAATATTAGGGAACCGCCTTCCATTGATATTGGACCAAAGCGGCTCAAAGTCCGAGGTCCCTCATTTTTGGGCTTAGAGAGCAGCAGATTTAATTGA 2568 0.4237 MVEGRVRLSKEARHGLEILKRRRLERAKLATATDTSVANMMNRSGGDALRASSSCGVRLHGNADAFSKRKVDKFDTSDLEWTDKIPECPVYTPTRDEFEDPLVYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKVFARRYCSAGCLPATYLEKEFWQEISCGKMETVEYACDVDGSAFSSSPTDQLGQSNWNLKKLSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHAALDFERVVREHVYTNDILSSDGEDGAFDVLLGKTTLFPPNILLEHKVPVYRAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAIASRRYALLNRIPLLPHEELLCKEAMLLYTSLELEDPDFPSADLLYHNCIRASFVNLMRFQHCARWLLMKSRACISVSSHSHGAILCSVCKRDCYVAFVDCNCHLHPVCLRHDIESLDFTCGSKYTLFLREDIMDLEAAAKKFEQEDGILEEILKQTQRDQNMYSYPLLNMFQKAEANGYTPYCELKLDSVVEFYTTPEQTSSNQECGTQSQHVFRHCLEYIKPEVSEISFTSAASALCSLSEHLDSPALKNPVGHANFKLGSIDFEDFGETISKSAFESSTSAAPQYQESLCKPQGNLHRFDTKPIVDNGSDDSDSEMFRVKRPSSLKAERRNANDASYLKQSEQQGLKRLKKVLPEARSVQSMDISRTNESSYKYGHPVNHKLDGERDRFSRGNGIPISVRYKKFGNEEICRQRDHHRRDKVQQNIREPPSIDIGPKRLKVRGPSFLGLESSRFN* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0161 855 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
Aev05g0161 855 SMART cupin_9 232 405 IPR003347 -
Aev05g0161 855 Coils Coil 524 544 - -
Aev05g0161 855 MobiDBLite consensus disorder prediction 777 791 - -
Aev05g0161 855 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Aev05g0161 855 MobiDBLite consensus disorder prediction 694 744 - -
Aev05g0161 855 SMART JmjN_1 87 128 IPR003349 -
Aev05g0161 855 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Aev05g0161 855 Pfam C5HC2 zinc finger 485 536 IPR004198 -
Aev05g0161 855 PANTHER LYSINE-SPECIFIC DEMETHYLASE 49 850 - -
Aev05g0161 855 MobiDBLite consensus disorder prediction 770 791 - -
Aev05g0161 855 Gene3D Cupin 88 436 - -
Aev05g0161 855 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 49 850 - -
Aev05g0161 855 Pfam jmjN domain 89 121 IPR003349 -
Aev05g0161 855 SUPERFAMILY Clavaminate synthase-like 166 421 - -
Aev05g0161 855 MobiDBLite consensus disorder prediction 813 839 - -
Aev05g0161 855 MobiDBLite consensus disorder prediction 704 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0161 Aev-Chr5 1244906 1250677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0161 85 555 JUMONJI Transcription Factor Family AT2G34880 32.969 1.49e-64 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev05g0161 JmjC 4.2e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0161 - - gmx:100798611 1395.18