Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0159 ATGTATGGGGATTGCCAAGTAATGGGAGGGAACGTAGTAGTAAACTCAGAGACGCTGTTCTCGTCAGCCATCCACCAGACCACAAACTTCACCTTCATGCCTTCCCTCCCTCCTCCTCCTCCTTTCCAATCTTTTCCCACCATGAAAGAAGAAGATGGGATGGTGAGATCAACAAGCGGGGGGAAGGAAGAGATAATGGAGAGTGGGTCTGGAAGTGAGCAGTTAGTTGAGGACAAGTCCGGGAACGAAGACCAAGACATCAGTGATCAACTGCCTCTCAATACTAATACTAATAATAAGAAGAAGCGCTACCACAGGCACACCGCTCGCCAGATCCAAGAAATGGAAGCATTGTTCAAGGAATGCCCACACCCTGACGACAAGCAGAGGCTCAAACTCAGCCATGACTTGGGCCTTAAACCTCGCCAGGTCAAGTTCTGGTTCCAGAACCGCCGAACCCAGATGAAGGCACAGCAAGATAGGGCGGATAATGTGATACTAAGAGCGGAGAATGAGACGCTAAAGAATGAGAACTACAGGCTACAAGCAGCGTTACGGAATGTTATATGTCCCAATTGTGGTGGCCCTGCCATCATGGCCGCTGACCTCGCCTTGGATGAACACCAACTTCGTCTTGAAAATGCACGCCTCAGGGAAGAGTTAGAACGAGTATGTTGCCTAACATCAAGATACAGTGGGCGGTCCATCCAAACAATGGGTCCATCGCTGGACTTAGACATGAACAACATCTACTCATCAGCAAGGCACTTGACGGACCCCAACGTTATTGGCGAAATGATTCCAGTGCCAATGCTGCATCAGCACCCTCATCATGAGCTAGTAGAGGGTGGTGGCCTCCTGTTGCTGGAAGAGGAGAAGTCCCTCGCAATGGATCTTGCGGCGCCCTCCATGGCAGAGCTGGTCAAGATGTGCCACGCCGGCGAGCCGCTGTGGATCCGAAGCAGTGATGAGATGGTCATGAGTAGGGAAGAAGAATTAGAACAAGTGCTCAACTTTGAGGAGCACGCCAGGATGTTTCCTTGGCCCAACAACAGCAGGACCGCCACTGACCACCTTAGGACTGAAGCTTCCCGTCACACTGCTGTCGTTATTATGAACAGTGTCACTCTTGTTGATGCCTTCCTCGATGCTCACAAGTGGATGGAATTGTTTCCGACAATAGTTTCAAGAGCAAAAACTGTCCAAATTATATCTTCTAGTGCTTCTGGCCATGCAAGCGGCTCTCTTCAGCTGATGTATGCGGAATTCCAAGTTCTGTCTCCATTGGTATCGACGCGTGAGGCTCATTTTCTTCGATACTGCCAACAAAATGCGGAGGAGGGAACCTGGGCCATTGTGGATTATCCCATTGACACCTTTCACCAAACCACTTTCCACCCTCCTTCTTCTTCTTATCCTAGATACTGCAGGAGACCCTCTGGGTGTCTCATCCAGGACATGCCTAATGGGTACTCGAGGGTGACATGGGTTGAGCACGCCCAAGTAGAAGAGAAGCCTGTGCATCAGATATTCACCAACTATGTCTACAGCGGAATGGCCTTTGGAGCTCACCGCTGGCTTGCAGTTCTGCAGCGACAGTGTGAGAGGGTCGCCAGCCTCATGGCCAGAAACATTTCAGATCTTGGAGTGATACCGACAGCAGAGGCGAGGAAGAACTTGATGAAACTAGCCCAAAGAATGATAAGGACGTTTAGCGTGAACATGAGCAGTTCAAGTGGTCAGTCATGGACGGCAATCTCAGATTCCCCTGAAGACACAGTTAGGATCACAAGCAGGAAGATGACAGAGGCAGGGCAACCCAATGGGGTGATTCTTGGTGCCGTTTCAACCACTTGGCTCCCTTATTCTCACACCAAGGTCTTCAATCTCCTCAGGGATGAACGCCACAGATCTCAGATGGATGCTCTTTCCAATGGGAACTCACTGAATGAAGTGGCCCACATAGCAAATGGCTCCCATCCAGGAAACTGCATTTCCCTGCTCCGCATAAATGTAGCGAGCAACTCATCGCAAAATGTAGAGCTAATGCTGCAAGAGAGCTGCACGGATGAATCAGGGAGCTTGGTGGTGTACACGACCATCGACGTGGACTCCGTCCAGCTGGCAATGAGCGGAGAAGACCCTTCCTGCATTGCCCTTCTCCCACAGGGCTTCATCATTGTGCCAATGCACCAATCCTCACCACCCAATAATTGCAACAACACTGATGCTTCTTCATCTCTCTCTGTCTCTGGCTGCCTTCTAACTGTTGGGCTGCAGATCCTTGCCACCACAATCCCTTCCGCCAAGCTCAACCTGTCCAGCGTGACGGCCATCAACAACCACCTCTGCAACACTCTGCATCAGATCCAAGCTGCTCTCGCTGCTGCCAATGACACCAACAATGCTTTTGTGGGGTGTTGCACTGAGCCACCAACCCCCATCAAGCACTGA 2454 0.5081 MYGDCQVMGGNVVVNSETLFSSAIHQTTNFTFMPSLPPPPPFQSFPTMKEEDGMVRSTSGGKEEIMESGSGSEQLVEDKSGNEDQDISDQLPLNTNTNNKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENETLKNENYRLQAALRNVICPNCGGPAIMAADLALDEHQLRLENARLREELERVCCLTSRYSGRSIQTMGPSLDLDMNNIYSSARHLTDPNVIGEMIPVPMLHQHPHHELVEGGGLLLLEEEKSLAMDLAAPSMAELVKMCHAGEPLWIRSSDEMVMSREEELEQVLNFEEHARMFPWPNNSRTATDHLRTEASRHTAVVIMNSVTLVDAFLDAHKWMELFPTIVSRAKTVQIISSSASGHASGSLQLMYAEFQVLSPLVSTREAHFLRYCQQNAEEGTWAIVDYPIDTFHQTTFHPPSSSYPRYCRRPSGCLIQDMPNGYSRVTWVEHAQVEEKPVHQIFTNYVYSGMAFGAHRWLAVLQRQCERVASLMARNISDLGVIPTAEARKNLMKLAQRMIRTFSVNMSSSSGQSWTAISDSPEDTVRITSRKMTEAGQPNGVILGAVSTTWLPYSHTKVFNLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDESGSLVVYTTIDVDSVQLAMSGEDPSCIALLPQGFIIVPMHQSSPPNNCNNTDASSSLSVSGCLLTVGLQILATTIPSAKLNLSSVTAINNHLCNTLHQIQAALAAANDTNNAFVGCCTEPPTPIKH* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0159 817 Pfam START domain 302 536 IPR002913 GO:0008289
Aev05g0159 817 SUPERFAMILY Bet v1-like 555 791 - -
Aev05g0159 817 CDD START_ArGLABRA2_like 293 535 - -
Aev05g0159 817 Coils Coil 198 220 - -
Aev05g0159 817 Gene3D - 350 527 IPR023393 -
Aev05g0159 817 ProSiteProfiles START domain profile. 289 539 IPR002913 GO:0008289
Aev05g0159 817 PANTHER - 68 802 - -
Aev05g0159 817 ProSiteProfiles 'Homeobox' domain profile. 98 158 IPR001356 GO:0003677
Aev05g0159 817 ProSitePatterns 'Homeobox' domain signature. 133 156 IPR017970 GO:0000981|GO:0006355
Aev05g0159 817 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 68 802 IPR042160 -
Aev05g0159 817 CDD homeodomain 101 159 IPR001356 GO:0003677
Aev05g0159 817 SUPERFAMILY Bet v1-like 290 538 - -
Aev05g0159 817 Coils Coil 157 177 - -
Aev05g0159 817 MobiDBLite consensus disorder prediction 52 104 - -
Aev05g0159 817 Gene3D - 89 169 - -
Aev05g0159 817 Pfam Homeodomain 101 156 IPR001356 GO:0003677
Aev05g0159 817 SUPERFAMILY Homeodomain-like 87 159 IPR009057 -
Aev05g0159 817 SMART START_1 298 536 IPR002913 GO:0008289
Aev05g0159 817 SMART HOX_1 99 162 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0159 Aev-Chr5 1224704 1228729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0159 26 795 Homeobox Transcription Factor Family AT5G46880 56.716 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev05g0159 START 2.2e-38 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0159 - - cam:101514650 1173.3