Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0154 ATGAGCTTTCAGGACATCGAGGCTGGCCGGCCGTTCGCTTCACGCCGGGGTCTTTTGAACGGGAAGCAAGACCCTACGCAGGCGGTGGCTGCCGGAATATTCCAGATCAACACCGCCGTCTCCACCTTCCAGAGGCTCGTCAACACCCTCGGAACCCCCAAAGACACCCCTGAGCTCCGCGAGAAGCTGCACAAGACAAGGGTGCACATTGGGCAACTGGTGAAGGACACGTCAGCGAAGCTTAAGCAAGCTAGTGAAATTGATCACCATGCTAACGTCAATGCAAACAAGAAGATAGCAGATGCCAAATTAGCCAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAGGCACAGCGTCTTGCAGCTGAAAGGGAAACAGCATACACGCCATTTGTTTATCAAGCAGCTCATCCATCCAGTCATACAGCTAATGAAGATGTTAATTCTGACAAGGCTCCAGAACAGCGTGCCCTTCTAGCGGAATCCAGAAGGCAGGAGGTGCTGTTTTTAGATAATGAGATTGCCTTCAATGAGGCTATCATTGAGGAAAGAGAACAAGGCATTCAGGAAATTCAGCAGCAAATTGGTGAAGTCAATGAAATATTCAAAGATCTTGCTGTGCTTGTGCACGAACAAGGGGCCATGATTGATGATATCGGGTCGAACATTGAGCATTCCCATGAAGCAACTATACAAGCAAGATCCCAACTTGCAAAAGCTTCAAAGACTCAAAGATCAAATTCGTCTTTGGCATGCTTGCTTTTGGTGATATTTGGGATCGTGCTTCTAATCGTCATCGTTGTTCTTGCTGCTTAA 819 0.4737 MSFQDIEAGRPFASRRGLLNGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRVHIGQLVKDTSAKLKQASEIDHHANVNANKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVYQAAHPSSHTANEDVNSDKAPEQRALLAESRRQEVLFLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIEHSHEATIQARSQLAKASKTQRSNSSLACLLLVIFGIVLLIVIVVLAA* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0154 272 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 179 241 IPR000727 -
Aev05g0154 272 PANTHER SYNTAXIN OF PLANTS PROTEIN 2 271 - -
Aev05g0154 272 SMART tSNARE_6 174 241 IPR000727 -
Aev05g0154 272 Gene3D - 173 272 - -
Aev05g0154 272 Gene3D - 20 133 - -
Aev05g0154 272 Pfam Syntaxin-like protein 30 129 IPR006011 GO:0016020
Aev05g0154 272 CDD SynN 23 149 IPR006011 GO:0016020
Aev05g0154 272 PANTHER SYNTAXIN 2 271 IPR045242 -
Aev05g0154 272 ProSitePatterns Syntaxin / epimorphin family signature. 185 224 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aev05g0154 272 SMART SynN_4 14 127 IPR006011 GO:0016020
Aev05g0154 272 Pfam SNARE domain 216 267 IPR000727 -
Aev05g0154 272 SUPERFAMILY t-snare proteins 22 234 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0154 Aev-Chr5 1192142 1194654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0154 1 260 SNARE and Associated Proteins AT5G46860 76.154 1.20e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0154 - K08488 gmx:547656 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0154 05 1192142 1194654 Aev05g0154 05 1192142 1194654 ECH