Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0146 ATGGGAAGGGCACCATGCTGTGAGGAGGGTAGTGGTGTGAAGAAAGGGCCATGGACAGCAGAAGAAGATGAGAAGCTGATTGATTATATAAACAAGAACGGCCATGGAAGTTGGAGAACACTTGCAAAGCGTGCAGGCCTCAACAGGTGCGGCAAGAGCTGCAGGCTGAGGTGGACCAATTACCTCAGACCCGACATCAAGAGGGGCAAGTTCACCCCCCAAGAGGAGACCCTCATCATCAACCTTCATTCTCTCCTCGGAAACAAATGGTCAAAGATTGCAACCCATCTTCCAGGAAGGACTGACAATGAGATAAAGAATTTGTGGAACACACAAATAAGGAAGAAGCTTCTGCAGATGGGGATTGATCCAGAGACTCACAAGCCGAGGACAGATTTGAATCACCTCATGAATCTCTCACACCTACTTCTTGCTGGCATCATGCCAAGTTCTGTTGTTGGTCTACAAGGAGGGCATGTGGCACAACTTGCCAAGCTTCAATTGCTGCAAAATCTATTATTGCAGATTATGAGCAGCAACAATTCCCCGTCCTCATCATCATTTGTTAATAACCCTTACCTCTTAGGAAATCCCAGCCTCAATGATCCATTATCCAATACTAATGCATATCTTCTCAACGGACCATCAACAAACAGTAGTACCCTCCAAACTTTAGTGTTGCAAAATGAAGATTATGCAAACCCTGCTGCTGCTGCTGCTATATTTTCTCAATCAGGACAGAGTGACCCTCCACAACAGGGTCAGGGTCTTGATTACAGCAAAATTAGCAGTATTATTTTACATGAAAATTATGAAGCAGCAGGAACTAACAACCCATTGCCTGCATTAGTAGCATCATTTCCTGCAGGGAACCACATGGACCAAAACAATAGTTGTTGCACCACATCAGCTCCAACTTCCATCCATGACTCGCCTAATTATTCCAACACTACTGCCTTTGATGATTGGGCCAAGTTCCTTGAGGATGAGACAAGTGGATCCTACTGGAAAGAGATTCTTGAGTAA 1026 0.4493 MGRAPCCEEGSGVKKGPWTAEEDEKLIDYINKNGHGSWRTLAKRAGLNRCGKSCRLRWTNYLRPDIKRGKFTPQEETLIINLHSLLGNKWSKIATHLPGRTDNEIKNLWNTQIRKKLLQMGIDPETHKPRTDLNHLMNLSHLLLAGIMPSSVVGLQGGHVAQLAKLQLLQNLLLQIMSSNNSPSSSSFVNNPYLLGNPSLNDPLSNTNAYLLNGPSTNSSTLQTLVLQNEDYANPAAAAAIFSQSGQSDPPQQGQGLDYSKISSIILHENYEAAGTNNPLPALVASFPAGNHMDQNNSCCTTSAPTSIHDSPNYSNTTAFDDWAKFLEDETSGSYWKEILE* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0146 341 PANTHER MYB TRANSCRIPTION FACTOR 1 341 - -
Aev05g0146 341 SMART sant 67 115 IPR001005 -
Aev05g0146 341 SMART sant 14 64 IPR001005 -
Aev05g0146 341 Gene3D - 69 135 - -
Aev05g0146 341 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev05g0146 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aev05g0146 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 341 - -
Aev05g0146 341 Gene3D - 14 67 - -
Aev05g0146 341 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Aev05g0146 341 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Aev05g0146 341 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Aev05g0146 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Aev05g0146 341 CDD SANT 70 111 IPR001005 -
Aev05g0146 341 CDD SANT 17 62 IPR001005 -
Aev05g0146 341 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0146 Aev-Chr5 1139634 1140758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0146 1 341 MYB Transcription Factor Family AT5G16770 46.045 1.43e-86 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g0146 Myb_DNA-binding 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0146 K09422 - gmx:100810159 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0146 05 1139634 1140758 Aev05g0146 05 1139634 1140758 ECH