Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0140 ATGTCTTCATCATTAGGGGAATTAGCAGATCATCAAAACTCCAAAACCTCATCATCATCATCATCATCAACATCAACAACATCTTCTATATCATACAGCACTCCGCCAGCATTAATAGCATTCACCCTCACGGTGGTTGTGGTCTGTTTCATTTGCTTCAGCGCGGTCTACTTCTGTAGGTGCTACCTTGTGAGCGTAATTCAAACTTGGGCCTTACATCACCCTGCCTCTGCCACCCTCATGCGACTCTCCCCTGCACCAAATACCAACTCCCGTTCCCCATTCACAGGCCTCCACCCTTCACTCCTCCACTCCTTCCCCACATTCCCTTTTTCTTCCCTCCCCAAGGACGACACTATCAGAGAGATGAAATACAAGCTGGAGTGTGCTATTTGTCTCGTGGAATTCGAGGAGGATAGCACACTCCGGCAGCTGCCGGTTTGCTGGCACATGTTCCACCAGGACTGTGTAGACCTATGGCTGCGATCCAACAAGACGTGCCCCGTCTGCCGCACGGATCTCGAAACGAGAAAGTGTCTTGATGATGAGCACACCGTTGAGGAACAGGGTGGTGGTAGCAGTGATGAGGTGCGCATTGATGTGAATGAAGAAGAAGAAGAAGGTGGTGAAGCAGGGGAACAGAGGTTTTCACGGTCACATTCAACGGGGCACTCCATAGTTATGGTTAGAGGTGGAGGGGATAGGTTAGGAAGAAATGACGATGACGGGTACAGGTTGAGATTGCAGAAGCATGCTACGTTGGGATCAGTTGGGAGAGGAAAGCACAGTTGCAGCAGGAGTTGTGCCACTTACAGGGAGATGATGATGATGGTGGTGGTGGCAAGGCCTTCTACTACTGACTATCTTCAAATTATGCCTGCTTCTTCTTCCCCTATTGCTCTGCAAAATGTATAA 915 0.494 MSSSLGELADHQNSKTSSSSSSSTSTTSSISYSTPPALIAFTLTVVVVCFICFSAVYFCRCYLVSVIQTWALHHPASATLMRLSPAPNTNSRSPFTGLHPSLLHSFPTFPFSSLPKDDTIREMKYKLECAICLVEFEEDSTLRQLPVCWHMFHQDCVDLWLRSNKTCPVCRTDLETRKCLDDEHTVEEQGGGSSDEVRIDVNEEEEEGGEAGEQRFSRSHSTGHSIVMVRGGGDRLGRNDDDGYRLRLQKHATLGSVGRGKHSCSRSCATYREMMMMVVVARPSTTDYLQIMPASSSPIALQNV* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0140 304 MobiDBLite consensus disorder prediction 184 240 - -
Aev05g0140 304 PANTHER RING-H2 FINGER PROTEIN ATL29 20 208 - -
Aev05g0140 304 MobiDBLite consensus disorder prediction 184 198 - -
Aev05g0140 304 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g0140 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 177 IPR013083 -
Aev05g0140 304 Pfam Ring finger domain 128 171 IPR001841 -
Aev05g0140 304 SMART ring_2 129 170 IPR001841 -
Aev05g0140 304 PANTHER RING FINGER DOMAIN-CONTAINING 20 208 - -
Aev05g0140 304 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Aev05g0140 304 SUPERFAMILY RING/U-box 128 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0140 Aev-Chr5 1094558 1095811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0140 13 227 C3H Transcription Factor Family AT2G35420 33.036 2.09e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0140 - - ahf:112747412 259.996