Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0139 ATGAAGTTGGCTTTGCTATATATATGTATAAATGATTGCTGTGTGTTAGAAGCAAACAGTTTAGTTTGGTTTAGTTTTGAAGAGAGAAAAGATAGAATGGCTCTAGAAACTCTCTCATCTAACGAGCTTTCAAACTTCATCATCTATGACACTATCTCTGCAACTAATCCCTTTATCAGCCATGAGGCTGCTTTCTTATTAGAAGAAAACACAAGAGCTGATCATGCATTTGATAATAATAGCTTTGCAATAATGGGGACGACGACACGGAAACGGCAATCCGGCGAGGCAGAAGCAAATGGAAGCAGCAGGGCGGTGGGGCAGGGGAGGAAGAAGAGGAGGAGAAAGCCAAGGGTGTGCAAGAACAAGGAAGAAGCTGAGACTCAGAGAATGATTCACATTACAGTTGAAAGGAACCGAAGGAAGCAGATGAATGACCACCTTGCTGTTCTTCGTTCACTCATGCCTGAATCCTATGTCCAAAGGGGCGATCAAGCTTCTATAGTGGGTGGTGCTATAGAATTCGTGAAGGAGCTAGAGCAGCTAGTGCAGTCGCTTGAGGCACAAAAGTTGGAGGTTTTACAACAAGGCGGCAATGAAGAGCAGAAGAGAGCAATAATGTCGAAATTGATGAGACCACCCTTCTCCAATTTCTTTGTGTATCCTCAGTACACATGGTCCCAGGCTCCCACCAACAAATTCACATCTCAGACTCAAGCAGCCATAGCAGACATTGAGGTCACTCTCATTGAAACCCACGCAAACCTCAGAATCCTCTCCAAGAGAAGCACCAGGCACTTATCCAAGTTGGTTGCTGGTTTTCAAACTCTCTTTCTTACCATCCTACATCTCAATGTCACCTCCATCGACCCTTTGGTCCTCTATTCTATCAGTGCCAAGGTGGAAGAAGGATGCCAACTTGGTTCAGTAGATGAAATTGCAGGAGCAGTTCACCACTTGCTTAGAATGATAGATGAAGAGGCTTCAATTTGCAGCAGTTGA 1002 0.4441 MKLALLYICINDCCVLEANSLVWFSFEERKDRMALETLSSNELSNFIIYDTISATNPFISHEAAFLLEENTRADHAFDNNSFAIMGTTTRKRQSGEAEANGSSRAVGQGRKKRRRKPRVCKNKEEAETQRMIHITVERNRRKQMNDHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEQLVQSLEAQKLEVLQQGGNEEQKRAIMSKLMRPPFSNFFVYPQYTWSQAPTNKFTSQTQAAIADIEVTLIETHANLRILSKRSTRHLSKLVAGFQTLFLTILHLNVTSIDPLVLYSISAKVEEGCQLGSVDEIAGAVHHLLRMIDEEASICSS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0139 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 179 IPR011598 GO:0046983
Aev05g0139 333 Coils Coil 176 196 - -
Aev05g0139 333 SMART finulus 134 185 IPR011598 GO:0046983
Aev05g0139 333 Pfam Helix-loop-helix DNA-binding domain 129 180 IPR011598 GO:0046983
Aev05g0139 333 PANTHER TRANSCRIPTION FACTOR BHLH71 33 331 - -
Aev05g0139 333 CDD bHLH_AtFAMA_like 131 190 - -
Aev05g0139 333 MobiDBLite consensus disorder prediction 90 126 - -
Aev05g0139 333 PANTHER MAX DIMERIZATION, MAD 33 331 - -
Aev05g0139 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 194 IPR036638 GO:0046983
Aev05g0139 333 Gene3D - 120 196 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0139 Aev-Chr5 1088795 1090442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0139 120 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 55.191 2.97e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g0139 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0139 - - qlo:115970749 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0139 05 1088795 1090442 Aev05g0139 05 1088795 1090442 ECH