Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0138 ATGGCATCTCTTGGCAACCCAAGAACATGGGTTCCATACATGAACAGCAAGGACTGTTCTCAAGGATTTTGCAGCTTTTACTGTCCACAGTGGTGTTATGTTGTGTATCCACCACCTCCACCATTTGAACTCCCTGATGAAGATTCAAGTCCAAATTTCTCCCCTCTAGTCATAGCAATCATTGGTGTCTTGGCAAGTGCCTTTCTCCTTGTGAGCTACTACACCATAATATCCAAGTACTGTGGCAGCAGAGAATCCCCATCTTCAGAAAGAGATAGCATTGAAGAAGCAACACTTGTTTTGGAAGACAATCACAACCCTTCACTCCATGAGCCATGGCATGTCACAACAAATGGATTAGATGAGGCACTGATAAAGTCCATAACAGTTTGCAAGTACAAGAGAGGTGAAGGGTTAGTTGAGTTAACAGATTGTTCTGTTTGTCTCAGTGAGTTTCAAGAAGGAGAGAATATTAGGCTCTTGCCCAAGTGTAGCCATGCTTTCCACATCCCTTGTATCGACACGTGGCTCAAGTCTCACTCCAATTGCCCTCTATGCCGTGCAAGCATATTCACATTCAGTGCTTCTTCACCTTTTCATCACCAAGTGCAAGCTTCTTTGGTGGAACTACCTTCAGTAAGGAACGAGGCTTCATCAGAAAACAATAATAATCAGCATGTGGATGAAAGCATAGCCAATAGTGCAAGAGACAGTAATAATAATAGTGAGTTGGATGTTGTGGTGGAAGGAGAAGATGAAGAGGAAGAAGGTTCATTGCAGCATGGTAGATCAGTTCCAAAGAGTGCATTTCGTGCTTTCAGTGACTTAGGAAACATGAGGGGAAGGCATAGTGTGATTGAGATAAGAGATGAAGATTATGAATCAATCAGAAGATCAGTGTCTATGGACCATTCTTTTCAAAGGGGTCTTTCAGTTGCTGATGTGCTTCAAATGAATCAAGATCAAGTTATGGAAGAGTGTTCAAGTGAAGCTGGCAGTTCAAAGAGAGCAGTAAGGGGTGAGAGTAGTAGCAAATCAAGCTATAGAAGAAGGGTGTTGCATTGTGTTTTGAGTCCAATTGCAATGAAGAGGTCATTTTCCAGTGGAAGATTCTCTCTTAGTAGTACCAGAAATGGCAGGGGAAGGCAGGGGATTTTCCCTCTATGA 1167 0.4267 MASLGNPRTWVPYMNSKDCSQGFCSFYCPQWCYVVYPPPPPFELPDEDSSPNFSPLVIAIIGVLASAFLLVSYYTIISKYCGSRESPSSERDSIEEATLVLEDNHNPSLHEPWHVTTNGLDEALIKSITVCKYKRGEGLVELTDCSVCLSEFQEGENIRLLPKCSHAFHIPCIDTWLKSHSNCPLCRASIFTFSASSPFHHQVQASLVELPSVRNEASSENNNNQHVDESIANSARDSNNNSELDVVVEGEDEEEEGSLQHGRSVPKSAFRAFSDLGNMRGRHSVIEIRDEDYESIRRSVSMDHSFQRGLSVADVLQMNQDQVMEECSSEAGSSKRAVRGESSSKSSYRRRVLHCVLSPIAMKRSFSSGRFSLSSTRNGRGRQGIFPL* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0138 388 PANTHER RING-H2 FINGER PROTEIN ATL53-RELATED 1 377 - -
Aev05g0138 388 SMART ring_2 145 186 IPR001841 -
Aev05g0138 388 ProSiteProfiles Zinc finger RING-type profile. 145 187 IPR001841 -
Aev05g0138 388 CDD RING-H2_PA-TM-RING 144 187 - -
Aev05g0138 388 MobiDBLite consensus disorder prediction 215 242 - -
Aev05g0138 388 SUPERFAMILY RING/U-box 127 193 - -
Aev05g0138 388 Pfam Ring finger domain 144 187 IPR001841 -
Aev05g0138 388 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 377 IPR044675 -
Aev05g0138 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 193 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0138 Aev-Chr5 1083017 1084183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0138 1 341 C3H Transcription Factor Family AT3G03550 42.577 1.24e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0138 - - adu:107487194 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0138 05 1083017 1084183 Aev05g0138 05 1083017 1084183 ECH