Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0137 ATGGCAACATTAGAATCATCACTCTCCATCTTCGCATCATCTCATCGTTTTTCGAATAACAATCGTCTCTCTGCAAAATTACCACACTCCTTAAAGCTCCATGCTTCCACCTCTCTCTTCGCCCTTCCCAAAAACTTCGTATTCTCTTCCAAAGCCTCCTCTTCCACCAAAAGACTCTGTTTCATCTCGTGCTCTGCTTTGCAAGAAGCAGAAACAGAAACAGAAACAGAAACACAGACAACAACAACAACAGAGGAAAAATCAGAGCAACCCCAGCAAACAAGAAACGTCAAGAAGAAGCTCTACGTGTCAAACATACCTTGGTCTGTGTCGGTGGCGGACATTAAGGACCTGTTTGGCCAATGCGGAACTGTAACTGACGTCGAGATCATAAAGAACCAGAATGGGACGAGCAGAGGCTTTGGCTTCGTTACTATGGCTTCTGGGGAAGAGGCTCAAGCTGTTGTTGAGAAATTTCACTCTTATCAAATATCAGGAAGGATAATAAAGGTGGAGCTTGCAAAGAAGTTCAAGAAACCTTCACCGAGTCCTCCAGCTCCGGGCCCTCCTCCTGGAGAGACACGTCATGTAATTTATGCATCAAACCTTGCATGGAAAGTTAGATCAACCCATCTCAGAGAATTCTTTGCTGAGAATTTCAAGACACCAGTTTCAGCCAGGGTTGTCTTTGATACGCCTTCTGGAAAATCCACTGGATATGGATTTGTTTCTTTTCTTACAAAGGAGGATGCAGAGGCTGCAATTTCTGCTTTGGATGGGAAGGAGTTAATGGAACGACCACTTCGCCTTAAATTTAGCGAAAAGAAAGTTAAAGAAGCTGCAAGTGAAAAGGATGAAGCTGGAAGTGAAAAGAATGAAGACCAAGGTTCTGATACTCAGTTGGAAGAAAATCATAGATCCTAA 924 0.434 MATLESSLSIFASSHRFSNNNRLSAKLPHSLKLHASTSLFALPKNFVFSSKASSSTKRLCFISCSALQEAETETETETQTTTTTEEKSEQPQQTRNVKKKLYVSNIPWSVSVADIKDLFGQCGTVTDVEIIKNQNGTSRGFGFVTMASGEEAQAVVEKFHSYQISGRIIKVELAKKFKKPSPSPPAPGPPPGETRHVIYASNLAWKVRSTHLREFFAENFKTPVSARVVFDTPSGKSTGYGFVSFLTKEDAEAAISALDGKELMERPLRLKFSEKKVKEAASEKDEAGSEKNEDQGSDTQLEENHRS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0137 307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 101 169 IPR000504 GO:0003723
Aev05g0137 307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 198 269 IPR000504 GO:0003723
Aev05g0137 307 Coils Coil 270 290 - -
Aev05g0137 307 PANTHER CHLOROPLAST, PUTATIVE-RELATED 4 289 - -
Aev05g0137 307 MobiDBLite consensus disorder prediction 72 94 - -
Aev05g0137 307 SMART rrm1_1 197 271 IPR000504 GO:0003723
Aev05g0137 307 SMART rrm1_1 100 172 IPR000504 GO:0003723
Aev05g0137 307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 99 176 IPR000504 GO:0003723
Aev05g0137 307 MobiDBLite consensus disorder prediction 274 307 - -
Aev05g0137 307 SUPERFAMILY RNA-binding domain, RBD 95 190 IPR035979 GO:0003676
Aev05g0137 307 PANTHER OS02G0815200 PROTEIN 4 289 - -
Aev05g0137 307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 196 275 IPR000504 GO:0003723
Aev05g0137 307 Gene3D - 50 178 IPR012677 -
Aev05g0137 307 Gene3D - 179 287 IPR012677 -
Aev05g0137 307 SUPERFAMILY RNA-binding domain, RBD 179 278 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0137 Aev-Chr5 1076432 1079471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0137 98 286 Eukaryotic Initiation Factors Gene Family AT1G22760 25.888 6.91e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0137 - - gmx:100793319 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0137 05 1076432 1079471 Aev05g0137 05 1076432 1079471 ECH