Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0135 ATGTCTTGGTTGCTATCCTCAATGGATCCCGCGTTTCAGAGTCGAACGGTGGGATGCAACACGGCTCATGAGATCTGGAGCTGTTTGGAAGAATACTTCGCATCACAAACCCTAGCAAATGCTAAGCAACTTAAGATGACCCTGAGATCAATCAAGAAGCAAGGTCTTTCAGCCTCAGAATATCTTCTCCGTATCAAGAATATAGCGGATTGTCTCTCTGCAATTGGTTCCCCGCTGTCTCATCAAGATCACATAGATGCTATTTTGGATGGATTAGGCGACGAATACGCCTCTTTTGTAACATCTGCTCTTTTTCGCAAAGAACCCTACACTGTCTCAGAAATAGGAGCGCTAGTCATGGCTCAAGAGGAAATTCTTGCACGTTACCGCAACATGGATTCCGTCATGGTTCAAGCAAACTACTCGACTACAACCTCTCAGGACAATCGTTTTAGTGGTCGTGGAAATGGAGGTCGTCGGGGAAGAGGCGGCCGCTCTCGTGGGGGTAGAAATTACTGGTCTGCAACCAAACCCCAATTCCAGCTCTGCGGTCGTCATGGTCATGTGGTTCAACAATGTTACCACAGTTCTGATAATAATGCTATGCAAGATCAAATTGATCTTTTAAATTCTGATGTTGATAATTCCACCTCTGATGATCATGAGCATGCTTCTTTTACTACTGCTTCTCCTCAAGATTCTCAGGGTGCTGGAGGACCTGAGGATGAGGACAACAGGTGGCCACCGTGGTTGAAGCCACTTTTGAAAGAGAGCTTCTTTGTTCAATGCAAGCTACATGCTGATTCTCACAAGAGCGAATGCAATATGTATTGCTTGGACTGTATGAACGGTGCTCTCTGTTCTCTCTGCCTCGCCTACCACAAGGATCACCGTGCTATTCAGATTAGGAGGTCCTCATACCATGATGTGATAAGGGTGAATGAGATCCAGAAGGTGCTGGACATCACTGGCGTCCAGACCTACATTATCAACAGCGCAAGGGTTGTGTTCCTCAATGAGAGGCCTCAGCCAAGGCCTGGCAAAGGTGTCACCAACACTTGTGAAGTCTGCGAGCGCAGCCTCCTTGATTCTTACCGCTTCTGTTCTCTCGGCTGCAAGATTGTTGGAACATCTAAGAACTTCCAGAAGAAGAAGAAACAGTCAGCGGTGATGGCATCAGACTCGGAGGATTCATACAGCAGCAGCAGCAGCAGCCATGGCCGCCACAAGAACAGTAATAGTAAAGTCCAGAGCTTCACACCGTCCACACCACCTCCAACTTCAGTTAATTACAGAACGGCCAAGAGGAGAAAGGGAATTCCACACCGAGCCCCAATGGGAGGGCTAATCATAGAATACTAG 1362 0.4743 MSWLLSSMDPAFQSRTVGCNTAHEIWSCLEEYFASQTLANAKQLKMTLRSIKKQGLSASEYLLRIKNIADCLSAIGSPLSHQDHIDAILDGLGDEYASFVTSALFRKEPYTVSEIGALVMAQEEILARYRNMDSVMVQANYSTTTSQDNRFSGRGNGGRRGRGGRSRGGRNYWSATKPQFQLCGRHGHVVQQCYHSSDNNAMQDQIDLLNSDVDNSTSDDHEHASFTTASPQDSQGAGGPEDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKNFQKKKKQSAVMASDSEDSYSSSSSSHGRHKNSNSKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0135 453 MobiDBLite consensus disorder prediction 385 430 - -
Aev05g0135 453 MobiDBLite consensus disorder prediction 143 172 - -
Aev05g0135 453 MobiDBLite consensus disorder prediction 385 447 - -
Aev05g0135 453 PANTHER - 239 449 - -
Aev05g0135 453 Pfam PLATZ transcription factor 303 374 IPR006734 -
Aev05g0135 453 Pfam gag-polypeptide of LTR copia-type 2 124 - -
Aev05g0135 453 MobiDBLite consensus disorder prediction 211 247 - -
Aev05g0135 453 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 239 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0135 Aev-Chr5 1043732 1056357 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aev05g0135 Retrotran_gag_2 1e-16 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0135 - - ahf:112747407 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0135 05 1043732 1056357 Aev05g0135 05 1043732 1056357 ECH