Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0128 ATGGCCTCCTCCGAAGCCTTCACCGACAAGAACGCTGTCTTTCGGAAACTCAAGGTCAAGTCCGATAACAAGATGTGTTTCGATTGCAATGCGAAGAACCCAACATGGGCCTCCGTCACATACGGGATCTTCCTCTGCATTGATTGCTCAGCTGTTCATCGGAGTCTCGGTGTCCATATCAGCTTTGTCAGATCCACAAATTTAGACTCGTGGAGTCCTGAGCAACTAAAAACGATGAGTTTTGGAGGAAACAATCGTGCACATGTTTTCTTTAAGCAACATGGATGGACTGATGGTGGTAAGATAGAGGCCAAGTATACATCAAGAGCTGCAGAGTTATATAGACAAATTCTGTCTAAGGAAGTAGCTAAAAGTATGGCTGAGGAGGAAGGTTCTTCATCTGCACCTGTTGCTTCATCATCTGCACAAGCAGCTGATGGACTTCCAGACATAAGGACCAATGAATTCCCAAAAGAAAACATTATAGGAAAGCCTGAAGTGTCTGAGAGAACTACTTCACCTAGAGCTTCACATACAACAGTTTCCAGTACTGTGAAGAAGCCTATTGGCGCTAAAAAATCTGGGAAGATTGGTGGACTTGGTGCTCGGAAACTCACTTCAAAACCAAGTGAGTCTCTCTATGACCAGAAGCCAGAAGAACCACCTGCCCCAGTACCATCCACAGCAAAAAGCAATTTTTCTGCTCCACCATCAATGGCATCTCGGTTTGACTATGTGGAAAATGTCCAATCACCTGAATTGAATTCTGGAAGTGAAGGTTCAAATGTGCTTAGTCATGTGGCTCCACCTAAGTCGTCAAGCTTCTTTGCAGACTTTGGAATGGACAGTGGCTTTCCAAGGAAATCTGGGTCAAATGCATCTAAAGTGCAAATTCAGGAATCTGATGAAGCGAGAAAGAAGTTCTCAAATGCTAAATCTATTTCTTCATCCCAATTTTTCGGAGATCAGAACAAAGCTGCGGATGTGGCCGCTCAAGCAACCTTGTCAAAGTTTTCGGGTTCAACTGCCATCTCCAGTGCTGATCTCTTTGGCGACTCATCAGACGGCACCCTTGATCTCGCTGCCAGTGACCTCATCAATCGCCTATCGTTCCAGGCGCAACAAGATATATCTTCCCTTAAGAACATTGCTGGAGAGACTGGGAAGAAGCTCAGCTCCTTGGCCTCCACATTGATGACAGATCTTCAGGACCGAATACTCTAA 1224 0.4518 MASSEAFTDKNAVFRKLKVKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKTMSFGGNNRAHVFFKQHGWTDGGKIEAKYTSRAAELYRQILSKEVAKSMAEEEGSSSAPVASSSAQAADGLPDIRTNEFPKENIIGKPEVSERTTSPRASHTTVSSTVKKPIGAKKSGKIGGLGARKLTSKPSESLYDQKPEEPPAPVPSTAKSNFSAPPSMASRFDYVENVQSPELNSGSEGSNVLSHVAPPKSSSFFADFGMDSGFPRKSGSNASKVQIQESDEARKKFSNAKSISSSQFFGDQNKAADVAAQATLSKFSGSTAISSADLFGDSSDGTLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASTLMTDLQDRIL* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0128 407 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Aev05g0128 407 MobiDBLite consensus disorder prediction 166 187 - -
Aev05g0128 407 Pfam Putative GTPase activating protein for Arf 13 107 IPR001164 GO:0005096
Aev05g0128 407 SMART arf_gap_3 11 127 IPR001164 GO:0005096
Aev05g0128 407 MobiDBLite consensus disorder prediction 227 265 - -
Aev05g0128 407 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Aev05g0128 407 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Aev05g0128 407 PRINTS HIV Rev interacting protein signature 63 84 IPR001164 GO:0005096
Aev05g0128 407 MobiDBLite consensus disorder prediction 125 265 - -
Aev05g0128 407 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 407 - -
Aev05g0128 407 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 407 - -
Aev05g0128 407 CDD ArfGap_ArfGap2_3_like 9 124 - -
Aev05g0128 407 SUPERFAMILY ArfGap/RecO-like zinc finger 12 125 IPR037278 -
Aev05g0128 407 Gene3D Arf GTPase activating protein 1 143 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0128 Aev-Chr5 993108 997076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0128 14 92 C2H2 Transcription Factor Family AT4G21160 47.500 3.02e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0128 K12493 K11855 gmx:100785169 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0128 05 993108 997076 Aev05g0128 05 993108 997076 ECH