Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0126 ATGAACCTGTGGACAGACGATAACTCCTCCGTCATGGAGGCCTTCATGACCTCCTCAGACCTCTCTTCCCTCTGGCCCCCACCGCCACCGCCACCTCCTTCCACACAATCCGCCGTCACCTCCACCTCCGCCGCACACTTCAACCAGGACACGCTCCAGCAGCGTCTCCAGGCCCTCATCGAGGGTGCCAGGGAGTGCTGGACCTACGCCATCTTCTGGCAGTCCTCCTACGACTACTCAACCGCCGCCCCCACCTCCATCCTCGGCTGGGGCGATGGCTACTACAAGGGCGAGGAGGACAAGGCTAAGTCCAAGAACAAATCATCATCCCCGGAGGAGCAGGAGCACCGCAAGAAAGTCCTCCGCGAGCTCAATTCTCTAATCTCTGGTTCCTGCGCCGCCACCCCTTCCGACGACGTCGACGAGGAAGTCACCGACACCGAGTGGTTCTTCCTCATCTCCATGACGCAGAACTTCGTAAACGGTACAGGTCTCCCTGGCCATGCTTTCTTCCACTCCACGCCGGTATGGCTCACTGGACCAGACCGCCTCGCCGGTTCATCGTGCGATCGGGCCAAGCAGGGTCAGGTCTTCGGTCTCCAAACCCTCGTTTGCATACCATCCCAAAACGGCGTCGTTGAGCTAGGTTCTACGGAGATGATCTTCCAGAACCCCGATCTGATGAATAAGGTTAGGGTTCTGTTCAATTTCAATAACAGTAACATCGACGTGGGCTCATCATGGCCGTTGACTGGGAGCACAACAACCACAGCCGCCGATCAAGGCGAGAACGACCCATCTTCTCTATGGCTAAACGACCCAGAAATTAGGGATTCTACGGTTACAACCGCTCCAGCTTCGGTTGTTTCCGCTAGCCACGTGCAGGGGATTGCGAGGCCGATGCAGTTTGAAACCCCGGGTTCGAGCACCTTAACGGAGGCGCCAAGTGCCGTTCACATACCTAACACTCCTCCTAACGGCGGTGGTGGCCCTCAATCGCAGAGCCAGAGTTTCTTCTCGAGGGAATTGAACTTCTCAGAATATGGATTTGAAGCTAACGCCGTGAAAACAGGGAGTAACCATCATTCTCTGAAACCTGAATCCGGGGAGATTCTGAGCTTCGGAGAGAGCAAGCGGAGCTCCTACGGAGGCGGCGGCGGAGGAAGCGGTAACTTCTTCTCCGGTCAGTCGCAGTTCGTCGCTGCTGCAGCAGAAGACAACAGTAGCAAGAAGAGGCGGTCGCCGAATTCAAGAGGAAGCAACAACGACGATGGCATGCTCTCCTTCACCTCCGGCGTGGTTGTCCCGCCTCCGAACATGAAATCCAGCGGCGGCGGCGGCGATTCTGACCACTCCGATCTCGAGGCTTCGGTGGTTAAAGAAGCTGACAGCAGCAGGGTGGTGGAGCCGGAGAAAAGGCCAAGGAAGAGGGGGCGGAAACCAGCGAACGGAAGAGAAGAGCCCTTAAACCACGTGGAAGCAGAGAGGCAGAGAAGAGAGAAGCTGAACCAGAGATTCTATGCGCTCCGCGCGGTGGTTCCGAATGTGTCAAAGATGGACAAAGCTTCACTCCTCGGCGACGCAATTTCCTACATCACTGAGCTCAAGTCAAAGCTCCAAAACCTCGAATCAGACAAAGACGGATTAGAGAAGCAACTCGATTCTGTTAACAAGGAGCTCGAGAAGGCGAAGAAGGATGCTTCATCCTCCGCCGCTCCTCCACCCTCTTCCCTCCCCGACAAGGAATTGAGGATGTCTTCGTCCTCCAACAACGTCGTTGTTGGTGGGAAGTTAATTGATTTGGAAATAGACGTGAAGATCATTGGCTGGGACGCAATGATAAGGATCCAATGCAACAAGAAGAACCACCCCGCCGCTAAGTTGATGGCGGCTCTGATGGAGCTTGACTTGGATGTCCACCACGCCAGTGTTTCTGTGGTGAATGATTTGATGATCCAACAAGCAACGGTGAAGATGGGGAGCAGGTTCTACACTCAGGAGCAGCTTAGGTCTGCTCTAACGTCCAAAGTTGGTGGTGATGTCCGATAG 2049 0.553 MNLWTDDNSSVMEAFMTSSDLSSLWPPPPPPPPSTQSAVTSTSAAHFNQDTLQQRLQALIEGARECWTYAIFWQSSYDYSTAAPTSILGWGDGYYKGEEDKAKSKNKSSSPEEQEHRKKVLRELNSLISGSCAATPSDDVDEEVTDTEWFFLISMTQNFVNGTGLPGHAFFHSTPVWLTGPDRLAGSSCDRAKQGQVFGLQTLVCIPSQNGVVELGSTEMIFQNPDLMNKVRVLFNFNNSNIDVGSSWPLTGSTTTTAADQGENDPSSLWLNDPEIRDSTVTTAPASVVSASHVQGIARPMQFETPGSSTLTEAPSAVHIPNTPPNGGGGPQSQSQSFFSRELNFSEYGFEANAVKTGSNHHSLKPESGEILSFGESKRSSYGGGGGGSGNFFSGQSQFVAAAAEDNSSKKRRSPNSRGSNNDDGMLSFTSGVVVPPPNMKSSGGGGDSDHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQNLESDKDGLEKQLDSVNKELEKAKKDASSSAAPPPSSLPDKELRMSSSSNNVVVGGKLIDLEIDVKIIGWDAMIRIQCNKKNHPAAKLMAALMELDLDVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRSALTSKVGGDVR* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0126 682 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 489 554 IPR036638 GO:0046983
Aev05g0126 682 MobiDBLite consensus disorder prediction 375 394 - -
Aev05g0126 682 SMART finulus 492 541 IPR011598 GO:0046983
Aev05g0126 682 Gene3D - 478 568 IPR036638 GO:0046983
Aev05g0126 682 Pfam Helix-loop-helix DNA-binding domain 490 535 IPR011598 GO:0046983
Aev05g0126 682 MobiDBLite consensus disorder prediction 560 586 - -
Aev05g0126 682 CDD bHLH_AtAIB_like 483 559 - -
Aev05g0126 682 MobiDBLite consensus disorder prediction 20 44 - -
Aev05g0126 682 PANTHER TRANSCRIPTION FACTOR MYC2 32 678 - -
Aev05g0126 682 MobiDBLite consensus disorder prediction 253 273 - -
Aev05g0126 682 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 235 IPR025610 -
Aev05g0126 682 MobiDBLite consensus disorder prediction 453 496 - -
Aev05g0126 682 MobiDBLite consensus disorder prediction 99 118 - -
Aev05g0126 682 Coils Coil 532 566 - -
Aev05g0126 682 MobiDBLite consensus disorder prediction 303 336 - -
Aev05g0126 682 MobiDBLite consensus disorder prediction 303 319 - -
Aev05g0126 682 PANTHER MYC 32 678 IPR045084 GO:0003700|GO:0006355
Aev05g0126 682 MobiDBLite consensus disorder prediction 570 586 - -
Aev05g0126 682 MobiDBLite consensus disorder prediction 402 496 - -
Aev05g0126 682 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 486 535 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0126 Aev-Chr5 979526 981574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0126 1 678 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.396 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g0126 bHLH-MYC_N 5.4e-54 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0126 K13422 - gmx:100776289 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0126 05 979526 981574 Aev05g0126 05 979526 981574 ECH