Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0115 ATGTCTTCGCCGGTGCTGGTTCCGGAGGAGGAGGGGCGGAGCAAAATCTCTTCTACGGTAGCATCCGCCTCTTCACAAACCTTGGACTGTTTCACCCAAAATGGGGGCGGTTTGAAAGAGCGCAATTACCTTGGATTGTCTGATTGCTCATCAGTGGACAGTTCTAACTCCGCTGTCCCAAGCTTGTGTGATGAGAAAAAGGGCAACCTGAATCTGAAGGCTACCGAGTTGAGGCTTGGTCTCCCAGGATCCCAATCACCAGAAAGGGATCCAGATGTTTACTCTTTGAGCTCAACGAAGCTAGACGAGAAGCCGCTGTTCCTGTTGCTTCCTACTAAAGATGGAATCTGCGCTTCGACTCAGAAGACTGTAGTGGTTTCAGGAAATAAGAGGGGCTTTGCCGATACCATGGATGGATTCACTCAGGGGAAGTTTGCCGGTAATTCAGGGATTACTGCAATGTTATCACCTCGACCTTCTGGTGCTCAGCCGGCCACAGTGAAGGAAATGCCAAACAAGGTGTTACAAGAACGGCCTTGTGCTGCTAATGGAACTGGTCATAATTCTGTCAGTGCCACTGCCCCAGCTTCTAAGGCACAGGTTGTTGGTTGGCCTCCTATTAGATCATTTAGGAAAAACTCCATGGCAACTGCATCTAAGAACAATGATGAAGTGGATGGAAAACCTGGTCCTGCCGCACTCTTTGTGAAGGTCAGCATGGATGGTGCTCCCTATCTCAGGAAGGTGGATCTGAGAAGTTATACAACATATCAGGAACTATCTTCTGCCCTCGAGAAGATGTTCACTTGTTTTACTCTAGGTCAGTGTGGTTCCCATGGAACTCCAGGAAGAGAAATGTTGAGTGAGAGCAAGCTGAGGGACCTTCTGCATGGTTCAGAATATGTACTCACTTATGAGGATAAAGATGGGGATTGGATGCTTGTAGGGGATGTACCATGGGAGATGTTCATTGAGACATGCAAAAGGTTGAAAATCATGAAGGGTTCTGATGCCATTGGCTTAGCTCCTAGGGCCATGGAGAAATCCAAAAGCAGGTGTTAA 1062 0.4793 MSSPVLVPEEEGRSKISSTVASASSQTLDCFTQNGGGLKERNYLGLSDCSSVDSSNSAVPSLCDEKKGNLNLKATELRLGLPGSQSPERDPDVYSLSSTKLDEKPLFLLLPTKDGICASTQKTVVVSGNKRGFADTMDGFTQGKFAGNSGITAMLSPRPSGAQPATVKEMPNKVLQERPCAANGTGHNSVSATAPASKAQVVGWPPIRSFRKNSMATASKNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLRSYTTYQELSSALEKMFTCFTLGQCGSHGTPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCKRLKIMKGSDAIGLAPRAMEKSKSRC* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0115 353 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 346 IPR003311 GO:0005634|GO:0006355
Aev05g0115 353 MobiDBLite consensus disorder prediction 1 25 - -
Aev05g0115 353 SUPERFAMILY CAD & PB1 domains 231 334 - -
Aev05g0115 353 Pfam AUX/IAA family 75 344 IPR033389 -
Aev05g0115 353 PANTHER AUXIN-INDUCED PROTEIN 19 346 - -
Aev05g0115 353 Gene3D - 230 346 - -
Aev05g0115 353 ProSiteProfiles PB1 domain profile. 233 337 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0115 Aev-Chr5 886563 889370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0115 235 338 B3 DNA Binding Superfamily AT5G37020 32.692 9.93e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Aev05g0115 AUX_IAA 1.7e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0115 K14484 - gmx:547502 581.637