Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0112 ATGGAGCTTCCTCAACTTGGTTTTCTGGAGGAACTACTTGCTCCAAAGAGAGACCCTTGGAATAATAATAACAATGCTCTGTCCACAGCTTTGAATGAGCTTCTTCTCCCTACTGTTGGTTGGAGCTTTGATTACTCTTTTGATGAGAACCCTTCTCTGAATAATCCTTCATTTTCTGCATTCTCATCAATAGACCACAGATTTGAGTGCCCTGATTATGGTCCTATCACTGCTGATGAAACACAAGCTCCATACCCTTTTCTTAATGGGTTCACAATGCCAGGGCTTGCTTCAGCACCACTCTTGCAACAAGAAGAGGACAACAAGAACAAGAGAGCAAGAATAATGGAGGATGAAGAGTTTGGTTTTTTTGGAGGAAGTGATAATAATCAGAGTTTTGACGAGAGAAACAGTGGCTGCAAAGTTGAGGAACAAGTTGATGAGGTTCCTCTGTTCAACATGGGAATGTGTGATGCAGAGAAAAAAATTACCAAGTCTAAGAAACTTGAAGGGCAACCCTCAAAGAATCTCATGGCAGAAAGAAGGAGAAGGAAGCGTTTGAATGATCGTCTTTCAATGCTAAGGTCAATAGTCCCTAAGATAAGCAAGATGGACAGGACTTCCATTCTTGGAGATACCATAGATTACATGAAGGAGCTTCTAGAAAGGATTGGTAAGTTGCAAGAAGAAGCAATGAATGAGGGAACTAATCAGATACACCTCTTAGACATTTCTAAGGACTTAAAGCCAAATGAAGCAATGGTAAGAAATTCCCCCAAGTTTGATGTTGAGAGGAGAGAACAAGACACCAGAATCAGCATCTGTTGTGCCACAAAGCCAGGGTTGTTGCTGTCAACAGTGAACACATTAGAAGCATTAGGGCTTGAGATTCATCAGTGTGTTATAAGCAGCTTCAATGATTTCTCAATGCAAGCATCTTGCTCAGAGGGTGCAGAGCAGAGAGATTGTATCAGCCCTGAAGAGGTAAAGCAAGCTCTATTCAGAAATGCAGGTTATGGTGGAAGATGTGTCTAA 1035 0.4155 MELPQLGFLEELLAPKRDPWNNNNNALSTALNELLLPTVGWSFDYSFDENPSLNNPSFSAFSSIDHRFECPDYGPITADETQAPYPFLNGFTMPGLASAPLLQQEEDNKNKRARIMEDEEFGFFGGSDNNQSFDERNSGCKVEEQVDEVPLFNMGMCDAEKKITKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEEAMNEGTNQIHLLDISKDLKPNEAMVRNSPKFDVERREQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSMQASCSEGAEQRDCISPEEVKQALFRNAGYGGRCV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0112 344 CDD ACT_UUR-ACR-like 270 311 - -
Aev05g0112 344 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 4 344 - -
Aev05g0112 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 232 IPR036638 GO:0046983
Aev05g0112 344 SMART finulus 177 226 IPR011598 GO:0046983
Aev05g0112 344 PANTHER HELIX-LOOP-HELIX, PUTATIVE, EXPRESSED-RELATED 4 344 - -
Aev05g0112 344 Coils Coil 217 237 - -
Aev05g0112 344 Pfam Helix-loop-helix DNA-binding domain 177 220 IPR011598 GO:0046983
Aev05g0112 344 Gene3D - 162 235 IPR036638 GO:0046983
Aev05g0112 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0112 Aev-Chr5 857375 858810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0112 167 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 70.787 2.80e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g0112 HLH 7.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0112 - - gmx:100806571 468.003